| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BURPS1106A_3218 |
|---|
| Symbol | |
|---|
| ID | 4899507 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Burkholderia pseudomallei 1106a |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009076 |
|---|
| Strand | + |
|---|
| Start bp | 3136657 |
|---|
| End bp | 3137463 |
|---|
| Gene Length | 807 bp |
|---|
| Protein Length | 268 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 67% |
|---|
| IMG OID | 640136444 |
|---|
| Product | cyclic diguanylate phosphodiesterase |
|---|
| Protein accession | YP_001067456 |
|---|
| Protein GI | 126451963 |
|---|
| COG category | [T] Signal transduction mechanisms |
|---|
| COG ID | [COG2200] FOG: EAL domain |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 7 |
|---|
| Plasmid unclonability p-value | 0.376001 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGGTTCCGC CCACCATTCC CGAGCTCGTC GCCCGCGCGG GCAAGCTCCC GTTCCTGTGC
GACCACCTTG CGCTCGCAGA CGGCGCGCAA GGCGCCTACG CGCGCCTACG CGATCTCAGG
CTGGAGAGTG TCTACGAGCC GATCTACGAT GTATCGATGC CGGGCGCGCC GCAATCGACG
TCGCTGTCCG ACGCGATCGA GCGCTACGGC GACGAACTCG GCTTCCAGGC GGTCACGCAC
GCGGGCGGCG CGCCGTTCGA TCCGATCGGC GCCGTCGCCG ACGATCAGGA GCTCGTCGCG
CTCGACCGGC TCGCGCGCAG CCTGCACGCG ATCAACTTCT TCGGCGCGCA GCGGCACGGG
CTGCTGTTCC TGCGCGTGCA CGAGCGGCTG CTGAAAAGCG TCAAGTACGA CCACGGCAAG
CACTTCTCGA CCGTGCTCAA GGGGTTCGGG CTGCCGCCCG AGCGCATCGT GATCGAGCTG
CCGGCGGCGG CCGTCGCGCA CAAGACGTTC CTCGGCTATC TGACGAAGAG TTATCAGCAC
TACGGCTTCA AGGTCGCGGA CAAGCTGCCG GATCCGGGGC GCATCCTCGC CGTCGAATCC
GACATGGCGC GGCCCGACTA CATCAAGATG GACGCCGCGA TCGCGCTGCG GGAAGGGATG
GTGAAGGCGC TCGTCGGCTA TGCGCAGCGC GTGCGCATTC CGCTCATCTT CGATCACGTC
GTCGACGAGA CGCAGTTCGA GCTGCTGCGC CAGTACGACG TGCGGCTCGT GCAGGGGCCG
GTGTTTTCGC AACCGGCCGC GGTGTAA
|
|---|
| Protein sequence | MVPPTIPELV ARAGKLPFLC DHLALADGAQ GAYARLRDLR LESVYEPIYD VSMPGAPQST
SLSDAIERYG DELGFQAVTH AGGAPFDPIG AVADDQELVA LDRLARSLHA INFFGAQRHG
LLFLRVHERL LKSVKYDHGK HFSTVLKGFG LPPERIVIEL PAAAVAHKTF LGYLTKSYQH
YGFKVADKLP DPGRILAVES DMARPDYIKM DAAIALREGM VKALVGYAQR VRIPLIFDHV
VDETQFELLR QYDVRLVQGP VFSQPAAV
|
|---|
| |