Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | BURPS1106A_3187 |
Symbol | |
ID | 4900439 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Burkholderia pseudomallei 1106a |
Kingdom | Bacteria |
Replicon accession | NC_009076 |
Strand | + |
Start bp | 3102202 |
End bp | 3103701 |
Gene Length | 1500 bp |
Protein Length | 499 aa |
Translation table | 11 |
GC content | 70% |
IMG OID | 640136413 |
Product | 2-hydroxychromene-2-carboxylate isomerase |
Protein accession | YP_001067425 |
Protein GI | 126454522 |
COG category | [R] General function prediction only |
COG ID | [COG2358] TRAP-type uncharacterized transport system, periplasmic component |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 4 |
Plasmid unclonability p-value | 0.636069 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | GTGCCGCGGC GCGGCGCTGC CGCAGCGGCG CCGAACTCGG GTACCATCGC CGCGAACAGA TCGCCCGCCT TCAGCCAGAT GAAGCCAGAA CCCACCCGCC GCCGCCGGCC GCACCGCATC GTCGCCCGCT TCGTCGCGGT GTCGTGGCGC GATCTCGCGA TGTCGATCGG GCCGACCGTC GTGCTGTCGA TCGCCGCGGT CTGGCTCGCG ATCGCGCTGA TCCAGCCCGC GCCGCCGACG TCGCTCACGA TCTCCGCCGG CCCGCCCGGC AGCACGAACT GGCGCTCGGC GCAGCGCTAC AAGCAGATCC TGGCGAAAAA CGGCGTGACG TTGCGCGTAC TCGAATCCGA GGGCTCGGCC GAAAATCTCG CACGGCTGTC GGACCCCGCG CAGAAGGTCG ATGTCGGCTT CGTGCAAAGC GGCATCGAGC AGAAGGGAAA GCACGAGGCT CTCGTGTCGC TCGGCAGCGT CGGCTACGTG CCGCTCGCGA TCCTGTATCG CGGGCCCGTG ATCGAGCGGC TGTCGCAGTT CAAGGGCAAG CGGCTCGCGC TCGGCGCCGA GGGCGCGGGC GCGCACGAGC TCGGCCTCGC GCTGCTGAAG ATGAACGGCA TCGTGCCGGG CGGCCCGACC CCGCTGCTGC CGCTGTCCGG CGAGGACGCC GCGCGCGCGC TGACGGAAGG CCGCATCGAC GCCGCGTTCC TGTCCGGCGA TTCGACGCAG ATTCCGGTGA TGGCCAAGCT GTTTCGCACG CCCGGCGTGC ACTTCTATTC GTTCACGCAG GCCGAGGCGT ACACGCGGCG CGTTGCATAC CTGACCGACA TCACGCTGCC GATGGGCGTC TACGATCCGG GCACGAACCT GCCGCCGTCG GACATTCACA CGCTGTCGCC CACCGTCGAG CTGATCGCGC GCGACACGCT CCACCCGGCG CTGTCGGACC TGCTCATCGA GGCGGCGCGC GACGTGCACG GCCGTGCGAC GATCCTGCAG CGCGCGGGCG AATTTCCGTC GCCCGTCACG CACAGCAGCT TCCTGTTGTC CGACGACGCC GCACGCTACT ACAAGTCGGG CAAGACCTTC CTGTACCGGA AGCTGCCGTT CTGGGTGGCG AGCCTCGTCG ACCGGCTGCT CTTCATCGTC GTGCCGCTCG TCGTCGTGCT GATTCCGGGG CTGCGGCTCG TGCCGACGCT GTACGGCTGG CGCGTGCGCT CGCGGATCTA CCGGTGGTAC GGCGCGCTCA TCGCGCTCGA GCGCAGCGCG CTCGGCGAGC ACACCGCGCA AGAGCGCGTC GTGCTGCTCG ACAAGCTCGA CGACGTCGAG GAATCAGTCA ACCGGATGAA GATGCCGCTC GCGTACGCCG GACAGTTCTA CGTGCTGCGC GAGCATATCG GCTTCGTTCG CGCGCGGCTG CTCGCGCGCG ATTACGAGAC GCCGCAGCCC GCCGCGGCGA AACCCGCGGG CGCGCCGCCC GCCGGTTCGC GTCAGCCGGG CGACGCTTGA
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Protein sequence | MPRRGAAAAA PNSGTIAANR SPAFSQMKPE PTRRRRPHRI VARFVAVSWR DLAMSIGPTV VLSIAAVWLA IALIQPAPPT SLTISAGPPG STNWRSAQRY KQILAKNGVT LRVLESEGSA ENLARLSDPA QKVDVGFVQS GIEQKGKHEA LVSLGSVGYV PLAILYRGPV IERLSQFKGK RLALGAEGAG AHELGLALLK MNGIVPGGPT PLLPLSGEDA ARALTEGRID AAFLSGDSTQ IPVMAKLFRT PGVHFYSFTQ AEAYTRRVAY LTDITLPMGV YDPGTNLPPS DIHTLSPTVE LIARDTLHPA LSDLLIEAAR DVHGRATILQ RAGEFPSPVT HSSFLLSDDA ARYYKSGKTF LYRKLPFWVA SLVDRLLFIV VPLVVVLIPG LRLVPTLYGW RVRSRIYRWY GALIALERSA LGEHTAQERV VLLDKLDDVE ESVNRMKMPL AYAGQFYVLR EHIGFVRARL LARDYETPQP AAAKPAGAPP AGSRQPGDA
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