| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BURPS1106A_3136 |
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| Symbol | |
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| ID | 4900387 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia pseudomallei 1106a |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009076 |
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| Strand | - |
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| Start bp | 3058325 |
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| End bp | 3059722 |
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| Gene Length | 1398 bp |
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| Protein Length | 465 aa |
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| Translation table | 11 |
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| GC content | 59% |
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| IMG OID | 640136362 |
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| Product | putative lipopolysaccharide ABC transporter, ATP-binding protein |
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| Protein accession | YP_001067374 |
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| Protein GI | 126455338 |
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| COG category | [G] Carbohydrate transport and metabolism
[M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG1134] ABC-type polysaccharide/polyol phosphate transport system, ATPase component |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 4 |
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| Plasmid unclonability p-value | 0.28076 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | TTGCCGGCAA TCAGCGTCCA AGACGTCAGC AAGCGCTTTC GCGTATTTGC CAAGCCGGCA
GACCGTCTGA AGGCCGCAGT TCGGCATCGC ATCGGCGGTC TCGCGAAGTT GGTGCCTGCT
CGTTTGCTCG GAACGGAAGG TGCAAGCGAG TTTCATGCGC TGCAGCATGT GTCGTTTCAC
GTACAAAAGG GCGAGACGAT CGGAATCATC GGCCGCAACG GCTCGGGAAA GTCGACGTTG
TTGCAGATCA TCTGCGGGAC GCTCACGCCG TCGGGTGGCC GGGTTGCGAT CAACGGGCGC
GTCGCCGCGC TGCTCGAACT CGGAGCGGGC TTCAATCCGG AGTTCACTGG CCGCGAAAAC
GTATACATGA ACGCGGCGTT GCTGGGCCTC TCGAAAGCAC AGATCGAGGA GCGGCTCGAC
GCCATCTTCG CTTTTGCCGA TATTGGCGGC TTCGTGGATC AACCGGTGAA GACCTATTCG
AGCGGCATGT ACGTGCGGCT TGCTTTTGCC GTCATTGCGC ACGTCGACGC CGACGTGCTC
GTGATCGACG AAGCGTTGGC CGTCGGGGAC GCATTCTTCA CGCAAAAGTG CATGCGTTTT
CTGCGCGCGT TCATGGAGCG GGGCACCGTT TTATTTGTCA GCCACGATAC GAACGCGGTG
GTCAATCTCT GTACCCGCGT CGTATGGCTT GACAAGGGGC GCGTTCGCGA AATCGGTCCG
GCAAAGGACG TTTGCGACTC GTATCTTGAG GCTTTCTACG AGGAGCAGCA TCGCGCATCG
GGGCGAAGCG TTCGCGCGCT TGAGCGCAGC AGTGTCGTGC GCGCAATAGC CGAAGGCGAT
ATGCGCGACC AGCGCGCATT GCTCATCAAC GCGTCGAAGC TGCGCAACGA CGTGGAGTTG
TTCCAGTTCA CTGCCGACGC GAAGAATTTC GGTCTTGGCG GCGCATCGAT TGAGCATGTC
GGCATCGAGG ATGGCACGGG GGCGCCGCTG AATTGGGTAG TGGGGGGCGA GATCGTTTGC
ATCCGCATCG CCGTCAAAGC CCTGCAGAAC CTGGAGCGTG CCATCGTCGG ATTCATTGTC
CGGGATCGGC TCGGGCAAAA TCTGTTTGGC GACAACACGT ATCTCACGAC CCTCAACGAG
CCGTTCGCTG TCGCGGCGGG CGAAAGTTTT TCGGTCCGAT TCGGGTTCAG AATGCCGGTC
TTGCCGGTAG GCGATTATTC GGTGACGGTT GCAGTCGCCG ACGGTTCACA AAGCGACCAC
GTGATCCACC AATGGCTGCA CGATGCGGTG TTGTTGAAGT CGCATTCGAC GAGTGTCAGT
ACAGGATTAA TAGGTATTCC AATGCATGAG ATCGTGCTTG AGCGGGATAC GCTGAACGAA
GTTGGGGCGG CGCAATGA
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| Protein sequence | MPAISVQDVS KRFRVFAKPA DRLKAAVRHR IGGLAKLVPA RLLGTEGASE FHALQHVSFH
VQKGETIGII GRNGSGKSTL LQIICGTLTP SGGRVAINGR VAALLELGAG FNPEFTGREN
VYMNAALLGL SKAQIEERLD AIFAFADIGG FVDQPVKTYS SGMYVRLAFA VIAHVDADVL
VIDEALAVGD AFFTQKCMRF LRAFMERGTV LFVSHDTNAV VNLCTRVVWL DKGRVREIGP
AKDVCDSYLE AFYEEQHRAS GRSVRALERS SVVRAIAEGD MRDQRALLIN ASKLRNDVEL
FQFTADAKNF GLGGASIEHV GIEDGTGAPL NWVVGGEIVC IRIAVKALQN LERAIVGFIV
RDRLGQNLFG DNTYLTTLNE PFAVAAGESF SVRFGFRMPV LPVGDYSVTV AVADGSQSDH
VIHQWLHDAV LLKSHSTSVS TGLIGIPMHE IVLERDTLNE VGAAQ
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