| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BURPS1106A_3134 |
|---|
| Symbol | |
|---|
| ID | 4901346 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Burkholderia pseudomallei 1106a |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009076 |
|---|
| Strand | - |
|---|
| Start bp | 3055999 |
|---|
| End bp | 3057069 |
|---|
| Gene Length | 1071 bp |
|---|
| Protein Length | 356 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 61% |
|---|
| IMG OID | 640136360 |
|---|
| Product | NAD-dependent epimerase/dehydratase family protein |
|---|
| Protein accession | YP_001067372 |
|---|
| Protein GI | 126453040 |
|---|
| COG category | [G] Carbohydrate transport and metabolism
[M] Cell wall/membrane/envelope biogenesis |
|---|
| COG ID | [COG0451] Nucleoside-diphosphate-sugar epimerases |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 7 |
|---|
| Plasmid unclonability p-value | 0.983056 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | TTGGTTGACG GGAAAAAGAT CCTCGTGACC GGTGGGGCTG GCTTTATCGG CTGCGCGATA
TCGGAGCGAC TCGCAGCGCG TGCAAGCCGC TACGTCGTAA TGGACAACTT GCATCCGCAG
ATCCATGCGA GCGCGGTTCG TCCTGGCGCG CTTCACGAGA AAGCGGAACT CGTCGTTGCC
GACGTCACGG ACGCCGGTGC ATGGGATGCG CTGCTGAGCG ATTTTCAACC GGAAATCATC
ATACATCTGG CCGCCGAAAC GGGCACGGGC CAATCGCTGA CGGAAGCGAG TCGGCATGCG
CTCGTCAACG TCGTCGGCAC CACGCGGCTG ACGGACGCGC TCGTCAAGCA CGGCATCGTG
GTCGAGCACA TTCTGCTGAC GAGCAGCCGC GCGGTCTATG GCGAAGGGGC ATGGCAGAAG
GACGATGGCA CGATCGTTTA TCCCGGCCAA CGCGGGCGCG CCCAGCTCGA GGCTGCGCAA
TGGGATTTCC CGGGGATGAC GATGCTGCCT TCGCGTGCGG ACCGTACCGA GCCGCGGCCG
ACGAGCGTCT ATGGTGCAAC GAAGCTCGCG CAGGAACACG TACTGCGTGC ATGGTCGCTC
GCAACGAAAA CGCCGCTGTC GATTTTGCGT CTGCAGAACG TTTATGGCCC GGGTCAATCG
TTGACTAACT CCTATACCGG CATCGTCGCG CTTTTCTCTC GGCTTGCTCG CGAAAAGAAG
GTGATTCCGC TCTATGAAGA CGGCAATGTG ACGCGCGATT TTGTCAGTAT CGACGATGTG
GCGGACGCCA TTGTCGCGAC GTTGGTGCGC ACGCCGGAAG CACTCTCTCT TTTCGATATC
GGCTCCGGAC AGGCGACGAG CATTCTCGAT ATGGCTCGAA TCATCGCGGC GCATTACGGC
GCTCCCGAGC CGCAGATCAA CGGTGCATTC CGCGACGGAG ATGTACGACA CGCGGCGTGC
GACTTGAGCG AATCGTTGGC GAACCTTGGA TGGAAGCCGC AGTGGTCGCT CAAACGCGGG
ATCGGCGAAT TGCAGACCTG GATCGCGCAA GAGCTTGATC GCAAGAACTA G
|
|---|
| Protein sequence | MVDGKKILVT GGAGFIGCAI SERLAARASR YVVMDNLHPQ IHASAVRPGA LHEKAELVVA
DVTDAGAWDA LLSDFQPEII IHLAAETGTG QSLTEASRHA LVNVVGTTRL TDALVKHGIV
VEHILLTSSR AVYGEGAWQK DDGTIVYPGQ RGRAQLEAAQ WDFPGMTMLP SRADRTEPRP
TSVYGATKLA QEHVLRAWSL ATKTPLSILR LQNVYGPGQS LTNSYTGIVA LFSRLAREKK
VIPLYEDGNV TRDFVSIDDV ADAIVATLVR TPEALSLFDI GSGQATSILD MARIIAAHYG
APEPQINGAF RDGDVRHAAC DLSESLANLG WKPQWSLKRG IGELQTWIAQ ELDRKN
|
|---|
| |