| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BURPS1106A_3105 |
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| Symbol | |
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| ID | 4901985 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia pseudomallei 1106a |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009076 |
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| Strand | + |
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| Start bp | 3026887 |
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| End bp | 3028089 |
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| Gene Length | 1203 bp |
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| Protein Length | 400 aa |
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| Translation table | 11 |
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| GC content | 68% |
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| IMG OID | 640136331 |
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| Product | putative amino acid ABC transporter, permease protein |
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| Protein accession | YP_001067343 |
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| Protein GI | 126451529 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG4177] ABC-type branched-chain amino acid transport system, permease component |
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| TIGRFAM ID | [TIGR03408] urea ABC transporter, permease protein UrtC |
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Plasmid Coverage information |
| Num covering plasmid clones | 7 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGCTTCGA CGATCCATTC CCTTGCCGTC GCGCGCGGCG CGTCGCCCGC TTCGTCCACG
GCATCCGCCG CGTCCGCTTC ACCGGCTGCG CCGCGCTTCG CGCTCGGCCT GCCGCCGCGC
CCCGCGCTGC TCTCGCGCCG CGCGTGGCTC GCGCTCGTCG CGCTGTGCAT CGCGGTCGGC
GTGGGGGTGC CGCTCGCCGC GCTCGTCGCG CCCGAAGCGA GCGCATTTCA TCTGTCATCC
TACGCAATGA CGCTCGCGGG CAAGCTGATG TGCTACGCGA TCGCCGCGCT CGCGCTCGAT
CTCGTCTGGG GCTACTGCGG CATCCTGAGC CTCGGGCACG GCCTGTTCTT CGCGCTCGGC
GGCTATGCGA TCGGCATGTA CCTGATGCGC GCGATCGGCC GCGACGGCAA GTACGGCAGC
GATCTGCCCG ACTTCATGGT GTTTCTCGAC TGGCACCGGT TGCCGTGGTA CTGGAGCGGC
ACCGAGCATC TCGCGTATGC GCTCGCGCTC GTCGTGCTCG TGCCCGCCGC GCTCGCGTGG
GTGTTCGGCT TCTTCACGTT CCGCTCGCGC GTGAAAGGCG TGTATCTGTC GATCATCACG
CAGGCGACGA CGTTCGCCGC GATGCTGCTC TTCTATCGCA ACGAGACGGG CTTCGGCGGC
AACAACGGCT TCACCGATTT CAAGCGTATC GCCGGCTTCG CGATCACGTC GCCCGGCACG
CGCACGGTGC TGTTGCTGAC GACGTTCGCG GCGCTCGTCG CGTCGTTCGT CGCCGCGCGC
GCGATCGTCA CGAGCAAGCT CGGCCGCGTC GTCACCGCGA TCCGCGACGG CGAGACGCGC
GTCATGTTCC TCGGCTACAG CCCGCTCGCG TACAAGCTCT TCGTATGGGT GGTATCGGCC
GTGCTGTGCG CGATCGCGGG CGCGCTGTAC GTGCCGCAGG TCGGCATCAT CAACCCGAGC
GAGATGTCGC CCGGCAACTC GATCGAGATG GCGATCTGGG TCGCGGTGGG CGGCCGCGGC
ACGTTGATCG GCCCGATCGT CGGCGCGTTC GCCGTCAACG GCGCGAAGAG CGTGTTCACC
GCGTACTTCG CCGAATACTG GCTGTTCTTC CTCGGCCTCA TCTTCGTGCT CGTGCCGCTC
GTGCTGCCGC GCGGCATCAT GGGCCTCGTC GAAACCGTCA TGCGCAAGGC CACGTCACGA
TGA
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| Protein sequence | MASTIHSLAV ARGASPASST ASAASASPAA PRFALGLPPR PALLSRRAWL ALVALCIAVG
VGVPLAALVA PEASAFHLSS YAMTLAGKLM CYAIAALALD LVWGYCGILS LGHGLFFALG
GYAIGMYLMR AIGRDGKYGS DLPDFMVFLD WHRLPWYWSG TEHLAYALAL VVLVPAALAW
VFGFFTFRSR VKGVYLSIIT QATTFAAMLL FYRNETGFGG NNGFTDFKRI AGFAITSPGT
RTVLLLTTFA ALVASFVAAR AIVTSKLGRV VTAIRDGETR VMFLGYSPLA YKLFVWVVSA
VLCAIAGALY VPQVGIINPS EMSPGNSIEM AIWVAVGGRG TLIGPIVGAF AVNGAKSVFT
AYFAEYWLFF LGLIFVLVPL VLPRGIMGLV ETVMRKATSR
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