| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BURPS1106A_3104 |
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| Symbol | |
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| ID | 4902320 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia pseudomallei 1106a |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009076 |
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| Strand | + |
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| Start bp | 3025257 |
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| End bp | 3026885 |
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| Gene Length | 1629 bp |
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| Protein Length | 542 aa |
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| Translation table | 11 |
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| GC content | 71% |
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| IMG OID | 640136330 |
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| Product | putative amino acid ABC transporter, permease protein |
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| Protein accession | YP_001067342 |
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| Protein GI | 226830772 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0559] Branched-chain amino acid ABC-type transport system, permease components |
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| TIGRFAM ID | [TIGR03409] urea ABC transporter, permease protein UrtB |
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Plasmid Coverage information |
| Num covering plasmid clones | 8 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCCCATGC CTTTGAGCCG CGCCGCTCGT GCGCTCGCGG CGCTCGCCGC CTGCGCGGCG
TTTTCGTTCG CCGCGCCGCG TGCGGCGCTC GCCGTCACGG CGGCCGACGT CGCCGCGCTC
GCCGGCGACG ACTTCGATGC GAAGCGCGCC GCGATCGACC GTCTCGCCGC CGGGCACGAC
GCCGCCGCGG CCGCGCTGCT GAACGCGCTC GCGAACGGCG ACGCGCTCGC GACCGACGCC
GGGCGCATCC TGATTCAGCA TGGCGACGCC GCGCGCGACG CACTGACGAA CGCGCCCGCG
CAGGCGGGCG ATGCGCAGCC GGTGATGCTC AACAACCTGC TGCGCGCGAA GATCGCGAAC
GCACTGTCGG GGCTCGATCT CGCGTCGCCC GACATCGACA CGCGCCGCCG CGCGATCGAT
GCGCTGCTCA AGCGCCCCGA TGCCGCGCTC AAGCCGATGA TCGACGCCGC GCGTGCGAAG
GAAACCGATC CCGTGCTCAA GCGCCGCCTC GACGCGCTAT GGGCGATCGC CGCGCTGCGC
GACGCCGATC CCGCGAAGCG CCTCGAAGCG GTGCGGCTCG TCGCCGCGCG AAGCGATCTC
GACATGATCG AGCAACTGCG CCCGCTCGTC GCGAAGCGGC CCGACGGCGG CGACGCGGAA
CCCGATGCGC GCGTGCGCGA GGCCGCGCAG CAGGGGCTCG GCGCGCTCTA TGCGATCCAG
CGCCGCGGCG AAATCGCGGG CACGCTGTTC GCGGGGCTCT CGCTCGGCAG CGTGCTGCTG
CTCGCCGCGC TCGGCCTCGC GATCACGTAC GGCCTCATCG GCGTCATCAA CATGGCGCAC
GGCGAGTTCC TGATGATCGG CGCGTATGCG ACCTACGTCG TGCAGACGCT CGTGCAGCGC
TATCTGCCCG GCGCGTTCGA CTGGTATCCG CTCGCCGCGA TTCCCGTGTC GTTCGCCGCG
GCCGCCGCGC TCGGCATCGT GCTCGAGCGC ACGGTGCTCA GGCACCTGTA TGGCCGCCCG
CTCGAGACGC TGCTCGCGAC GTTCGGCGTG AGCCTCATCC TGATCCAGGC GACGCGGATG
ATCTTCGGCG CACAGAACGT GCAGGTCGTC AATCCGTCGT GGATGAGCGG CGGCGTGACC
GTGATGCAGA ACCTGATCCT GCCGTACAAC CGCCTCGCGA TCCTCGCGTT CGCGCTCGTC
GTCGTCGGCA TCGCGTGGGC CGTGCTGACG AAAACGCGCC TCGGCCTGTT CGTGCGCGCG
GTCACGCAGA ACCGCCGGAT GGCCGCGTGC GTCGGCGTGA AGACGGCGCG CGTCGATTCG
TATGCGTTCG CGTTCGGCGC GGGCATCGCG GGCCTCGGCG GCTGCGCGCT GTCGCAGATC
GGCAACGTCG GCCCGGATCT CGGCCAGAGC TACATCGTCG ATTCGTTCAT GGCGGTCGTG
CTGGGCGGCG TCGGCCAGAT CGCGGGCACG GTGCTCGGGG GCTTCGGCCT CGGGCTCGTC
AGCAAGGCGA TCGAGCCGTT CTGGGGCGCG GTGCTCGCGA AGATCGCCGT GCTCGTGATG
ATCGTGCTGT TCATCCAGAA ACGCCCGCAA GGGATGTTCG CCCTGAAGGG CCGCAGCGCG
GAGGCATGA
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| Protein sequence | MPMPLSRAAR ALAALAACAA FSFAAPRAAL AVTAADVAAL AGDDFDAKRA AIDRLAAGHD
AAAAALLNAL ANGDALATDA GRILIQHGDA ARDALTNAPA QAGDAQPVML NNLLRAKIAN
ALSGLDLASP DIDTRRRAID ALLKRPDAAL KPMIDAARAK ETDPVLKRRL DALWAIAALR
DADPAKRLEA VRLVAARSDL DMIEQLRPLV AKRPDGGDAE PDARVREAAQ QGLGALYAIQ
RRGEIAGTLF AGLSLGSVLL LAALGLAITY GLIGVINMAH GEFLMIGAYA TYVVQTLVQR
YLPGAFDWYP LAAIPVSFAA AAALGIVLER TVLRHLYGRP LETLLATFGV SLILIQATRM
IFGAQNVQVV NPSWMSGGVT VMQNLILPYN RLAILAFALV VVGIAWAVLT KTRLGLFVRA
VTQNRRMAAC VGVKTARVDS YAFAFGAGIA GLGGCALSQI GNVGPDLGQS YIVDSFMAVV
LGGVGQIAGT VLGGFGLGLV SKAIEPFWGA VLAKIAVLVM IVLFIQKRPQ GMFALKGRSA
EA
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