Gene BURPS1106A_3076 details

Gene Information

• Locus tag: BURPS1106A_3076
• ID: 4899208
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Burkholderia pseudomallei 1106a
• Kingdom: Bacteria
• Replicon accession: NC_009076
• Strand: +
• Start bp: 3004684
• End bp: 3005361
• Gene Length: 678 bp
• Protein Length: 225 aa
• Translation table: 11
• GC content: 70%
• IMG OID: 640136302
• Product: LysE family translocator protein
• Protein accession: YP_001067315
• Protein GI: 126453975
• COG category: [E] Amino acid transport and metabolism
• COG ID: [COG1280] Putative threonine efflux protein

Plasmid Coverage information

• Num covering plasmid clones: 7
• Plasmid unclonability p-value: 0.331488
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

GTGATGAGCT TCGCCCCTAC GTCGATGCTG TCCGACGGCT TTTTCCTGTC GCTTTCGCTG 
TGCCTCGACA TCGGCCTCGT AAACGTCGCG ATGCTCTCGC TCACGCTGTC GCACGGGTTC 
AGGCCGGGCT TCTGGCTCGG CGTCGGCTCG TGCGTCGGCG ACCTCGTCTA TGCGGCGCTC 
GCGCTCGCCG GCATGGCCGT GCTGCTCAGG TTCGAAGCCG TGCGCTGGGT CGTGTGGCTC 
GGCGGCGGCG CGGTGCTGCT GTTTCTCGCG TGGAAGATGG CGCGCGAGGC GCTCTTTCCC 
GAACCGGCGC GCAATATCGA CGACGGCGCG CCCGCCGCCC TCGCGCGGGC GAGCACCTCG 
CGCAACTTCG CGCGCGGGAT GCTGCTCGCG ATGTCGTCGC CATCGGCGAT CCTGTGGTTC 
GCGGCGGTCG GCGGCGCGTT GATCGCGAAG GCCGGCGCGA CGACGCCCGC GAGCGCATCG 
GTGTTCCTGT CGGGCTTCTT CCTCGGCGGG CTCGCGTGGA CGCTCTTTCT CTGCACGCTC 
GCGAGCCAGG GCCGCAAGCG CGCGGGCGCG GGGCTGATGC GCGCGTGCCA CGTCGTGTCG 
GCGCTGCTTT TCGCGTACTT CGCGTACAGC GTGATCGTCG GCGGTTATCG CGACCTGATC 
CTGAACGCGG CGGCCTGA 

 

Protein sequence

MMSFAPTSML SDGFFLSLSL CLDIGLVNVA MLSLTLSHGF RPGFWLGVGS CVGDLVYAAL 
ALAGMAVLLR FEAVRWVVWL GGGAVLLFLA WKMAREALFP EPARNIDDGA PAALARASTS 
RNFARGMLLA MSSPSAILWF AAVGGALIAK AGATTPASAS VFLSGFFLGG LAWTLFLCTL 
ASQGRKRAGA GLMRACHVVS ALLFAYFAYS VIVGGYRDLI LNAAA