| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BURPS1106A_3072 |
|---|
| Symbol | |
|---|
| ID | 4901127 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Burkholderia pseudomallei 1106a |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009076 |
|---|
| Strand | + |
|---|
| Start bp | 2999575 |
|---|
| End bp | 3000768 |
|---|
| Gene Length | 1194 bp |
|---|
| Protein Length | 397 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 69% |
|---|
| IMG OID | 640136298 |
|---|
| Product | aminotransferase |
|---|
| Protein accession | YP_001067311 |
|---|
| Protein GI | 126453812 |
|---|
| COG category | [E] Amino acid transport and metabolism |
|---|
| COG ID | [COG0436] Aspartate/tyrosine/aromatic aminotransferase |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 10 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAATACCG CTGCCGATTC GCTCCTGAGG CTCGCGTCGC GCGTCGACGC GATCGAGCCG
TTCTACGTGA TGGAAATCGT CAAGGAAGCC GCCGTGCTCG AGCGCGCCGG CCGCGACATC
ATCCATATGA GCATCGGCGA GCCGGATTTC ACGGCGCCCG AGCCCGTCGT CGACGCGGCC
GCCGCCGCGC TGCGCCGAGG CGTCACGCAA TACACGAGCG CGCTCGGCAT CGCGCCGCTG
CGCGAGGCGA TCGCCGCGCA CTATGCGCGC GCGCACGGGC TCTCGATCGC ACCCGAGCGG
ATTGTCGTGA CGGCGGGCGC ATCGGCCGCG CTGCTGCTCG CGTGCCTCGC GCTCGTCGGC
CGCGACGACG AAGTGCTGAT GCCCGACCCG TCGTATCCGT GCAACCGCCA CTTCGTCGCG
ACGGCCGAAG GCCGCGCAGT GCTCGTGCCG AGCGGCCCCG AAACCCGCTT CCAGCTGACC
GCGGACGACG TGAAAACGCG CTGGGGCGAG CGCACGCGCG GCGTGCTGCT CGCGTCGCCG
TCGAACCCGA CGGGCACGTC GCTCGAGCCC GCCGAGCTCG GTCGGATCAT CGGCGCCGTT
CGCGCACGCG GCGGCTTTTC GATCGTCGAC GAGATTTACC AGGGGCTGAG CTACGACGGC
GCGCCCGTGT CGGCGCTGTC GTTCGGCGAC GACGTCGTCA CCGTCAACAG CTTCTCGAAA
TACTTCAACA TGACCGGCTG GCGGCTCGGC TGGCTCGTCG TGCCGCCGGC GCTCGTCGGC
ACGTTCGAGA AGCTCGCGCA GAACCTGTTC ATCTGCCCGT CCGCCCTCGC GCAGCATGCG
GCGCTCGCGT GCTTCGAGCC GGACACCCTC GCGATCTACG AGGCGCGCCG CGCCGAATTC
CGGCGTCGCC GCGATTTCAT CGTGCCGGCG ATCGAATCGC TCGGCTTCAA GGTGCCCGTG
ATGCCCGACG GCGCGTTCTA TGTGTACGCG CAATGCGGCG GCGTCGCGCA TCCGGCCGCA
GGAGACAGCG CCGCGCTCGT GAACGCGATG CTGCACGACG CGGGCGTCGT GCTCGTGCCG
GGGATGGATT TCGGAGTTCA TGCGCCGCGC GACTATATCC GCCTGTCCTA TGCAACCGCG
TACTCGCGGC TCGAAGAGGC GGTCGAGCGT CTCGGCAAGC TGTTCGGGCG CTAA
|
|---|
| Protein sequence | MNTAADSLLR LASRVDAIEP FYVMEIVKEA AVLERAGRDI IHMSIGEPDF TAPEPVVDAA
AAALRRGVTQ YTSALGIAPL REAIAAHYAR AHGLSIAPER IVVTAGASAA LLLACLALVG
RDDEVLMPDP SYPCNRHFVA TAEGRAVLVP SGPETRFQLT ADDVKTRWGE RTRGVLLASP
SNPTGTSLEP AELGRIIGAV RARGGFSIVD EIYQGLSYDG APVSALSFGD DVVTVNSFSK
YFNMTGWRLG WLVVPPALVG TFEKLAQNLF ICPSALAQHA ALACFEPDTL AIYEARRAEF
RRRRDFIVPA IESLGFKVPV MPDGAFYVYA QCGGVAHPAA GDSAALVNAM LHDAGVVLVP
GMDFGVHAPR DYIRLSYATA YSRLEEAVER LGKLFGR
|
|---|
| |