Gene BURPS1106A_3071 details

Gene Information

• Locus tag: BURPS1106A_3071
• Symbol: nusB
• ID: 4902542
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Burkholderia pseudomallei 1106a
• Kingdom: Bacteria
• Replicon accession: NC_009076
• Strand: +
• Start bp: 2999073
• End bp: 2999510
• Gene Length: 438 bp
• Protein Length: 145 aa
• Translation table: 11
• GC content: 66%
• IMG OID: 640136297
• Product: transcription antitermination protein NusB
• Protein accession: YP_001067310
• Protein GI: 126452933
• COG category: [K] Transcription
• COG ID: [COG0781] Transcription termination factor
• TIGRFAM ID: [TIGR01951] transcription antitermination factor NusB

Plasmid Coverage information

• Num covering plasmid clones: 14
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGAAGAAGA GCGCCCGCCG ACAATCGCGC GAGCTGGCGA CGCAGGGCCT GTATCAGTGG 
CTGCTGTCGA ACGCGGCGCC GGGCGAGATC GACGCGCAAT TGCGCGGCGC GCTGGGTTAC 
GACAAGGCCG ACAAGACGCT GCTCGACACG ATTCTGCACG GCGTGATCCG CGAGCATGCG 
ACGCTTGCCG AGGCGATCTC GCCGAGCCTC GACCGTCCGA TCGACCAGCT CTCGCCCGTC 
GAACGGGCGG TGCTGCTGAT CGCGACGTAC GAGCTCACGC ATCAGATCGA AACGCCGTAC 
CGCGTGATCA TCAATGAAGC CGTCGAGCTC GCGAAGACGT TCGGCGGCTC GGACGGCTAC 
AAGTACGTCA ACGGCGTGCT CGACAAGCTG GCCGTCAAGC TGCGCCCGGC CGAGACGCAA 
GCGCGGCGCG GCGCGTAA 

 

Protein sequence

MKKSARRQSR ELATQGLYQW LLSNAAPGEI DAQLRGALGY DKADKTLLDT ILHGVIREHA 
TLAEAISPSL DRPIDQLSPV ERAVLLIATY ELTHQIETPY RVIINEAVEL AKTFGGSDGY 
KYVNGVLDKL AVKLRPAETQ ARRGA