| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BURPS1106A_3052 |
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| Symbol | |
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| ID | 4899205 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia pseudomallei 1106a |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009076 |
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| Strand | - |
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| Start bp | 2980507 |
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| End bp | 2981754 |
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| Gene Length | 1248 bp |
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| Protein Length | 415 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 640136278 |
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| Product | carbohydrate ABC transporter periplasmic binding protein |
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| Protein accession | YP_001067291 |
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| Protein GI | 126452555 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG1653] ABC-type sugar transport system, periplasmic component |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 6 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAAAATTC GCGCGATCAT GGGCGCGCTC GGCGCCGCAG GCCTGTTGTT CGGCGCTGCC
GCAGCGCAAG CGGCAGAGAA TGTCACGGTG CTGCACTGGT GGACGTCGGG CGGCGAATCG
AAGGCGGTCG GCGTGCTGAA GGACGACCTG CAGAAGCAGG GCTACGTCTG GAAGGATTTC
GCGGTGGCGG GCGGCGCGGG CGCCGCGGCG ATGACCGCGC TGAAGACGAA GGTCATCAGC
GGCGACGCGC CGTCGGCCGC GCAGATCAAG GGGCCGCTGA TCCAGGAATG GGCGGACCAG
GGCGTGCTCG TGAACATCGA CGCGGCCGCG GGCGACTGGA AGCAGAACCT GCCGCCCGAG
ATCGACAAGA TCATCAAGTA CAAGGGCAAC ACCGTCGCGG CGCCGTTCTC GGTGCACCGC
GTGAACTGGC TCTACATCAA CAAGGCCGCG CTCGACAAGA TCGGCGCGAA GCCGCCCGCG
ACGTGGCCGG AATTCTTCCA GGTGGCCGAC AAGCTGAAGG CGGCGGGCAT CCAGCCGGTC
GCGATGGGCG GCCAGCCGTG GCAGGACCTG ACGCTGTGGG AAGACGTCGT GCTCTCGCAA
GGCGCCGACT TCTACAGGAA GGCGCTCGTC GAGCTCGACC AGAAGACGCT CACGTCGGAC
AAGATGCTCG AAGTCTTCAA CACCGTCCGC AAGATCCAGG GCTACTTCGA TTCGGGCCGC
AACGGCCGCG ACTGGAATCT GGCCACGGCG ATGGTGATCA ACGGCCGCGC CGGCATGCAG
TTCATGGGCG ACTGGGCGAA GGGCGAGTTC GAGGCGGCCG GCAAGAAGCC GGGCAAGGAC
TATATCTGCG CGGCGGTGCC GGGCACGGCG AATGCGTACA CGTTCAACGT CGATTCGTTC
GTGTTCTTCC AGCAGAAGGG CCAGAAGGCG GCCACGCCCG GCCAGATCGC GCTCGCCAAG
ACGATCATGA CGCCCGCGTT CCAGGAGCAA TTCAGCTTGC TGAAGGGTTC GATCCCGGTG
CGCCTCGGCG TGAAGATGGA CAAGTTCGAC GATTGCGCGA AGAAGTCCTA CGCCGACGAG
CAGACGGCGA TCAAATCGGG CGGCTACGTG CCGTCGCTCG CGCACGGCAT GGCGCAGGGC
GACGCGACCG CGGGCGCGAT TTCCGACGTC GTGACGAAGT TCATGAACTC GCAGCAGGAC
GCGAAGAGCG CGCTCGCCGC GCTCGCGCGC GCCGCGAAGG TGAAGTAA
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| Protein sequence | MKIRAIMGAL GAAGLLFGAA AAQAAENVTV LHWWTSGGES KAVGVLKDDL QKQGYVWKDF
AVAGGAGAAA MTALKTKVIS GDAPSAAQIK GPLIQEWADQ GVLVNIDAAA GDWKQNLPPE
IDKIIKYKGN TVAAPFSVHR VNWLYINKAA LDKIGAKPPA TWPEFFQVAD KLKAAGIQPV
AMGGQPWQDL TLWEDVVLSQ GADFYRKALV ELDQKTLTSD KMLEVFNTVR KIQGYFDSGR
NGRDWNLATA MVINGRAGMQ FMGDWAKGEF EAAGKKPGKD YICAAVPGTA NAYTFNVDSF
VFFQQKGQKA ATPGQIALAK TIMTPAFQEQ FSLLKGSIPV RLGVKMDKFD DCAKKSYADE
QTAIKSGGYV PSLAHGMAQG DATAGAISDV VTKFMNSQQD AKSALAALAR AAKVK
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