Gene BURPS1106A_3010 details

Gene Information

• Locus tag: BURPS1106A_3010
• Symbol: greB
• ID: 4900138
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Burkholderia pseudomallei 1106a
• Kingdom: Bacteria
• Replicon accession: NC_009076
• Strand: -
• Start bp: 2947367
• End bp: 2947930
• Gene Length: 564 bp
• Protein Length: 187 aa
• Translation table: 11
• GC content: 65%
• IMG OID: 640136236
• Product: transcription elongation factor GreB
• Protein accession: YP_001067253
• Protein GI: 126454976
• COG category: [K] Transcription
• COG ID: [COG0782] Transcription elongation factor
• TIGRFAM ID: [TIGR01461] transcription elongation factor GreB

Plasmid Coverage information

• Num covering plasmid clones: 9
• Plasmid unclonability p-value: 0.998685
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGAACAAGG CGTTTGTGAA GGAGTCGGAC GGAGACGACG ACGACCTCGA TTTCGCGCAG 
GCGGCGATTC CGCCCGGCGC AAAGAACTAC ATCACGCCGG CGGGCCACAA GCGCCTGCGC 
GACGAGCTGC TGCATCTGAT CGATGAAGCG CGTCCGGACG TGGTGAAGCT CGTGTCATGG 
GCGGCGTCGA ACGGCGATCG CTCGGAGAAT GGCGATTACA TCTATGGCAA GCGGCGTCTG 
CGCGAAATCG ATCGCCGCAT CCGCTTTTTG ACGAAGCGTC TCGATCTCGC CGAAGTCGTC 
GACGCGAGCC GCCAGGAGAA CGCCGATCAG GTGTTCTTCG GCGCGACCGT CGATTACGCG 
ACGCAGGACG GCAACGAGCA CACGGTGACG ATCGTCGGCG TCGACGAGGT CGATCTCGAC 
CGCGGACACG TGAGCTGGAT CTCTCCCGTC GCACGTGCGC TGCTCAAGGC GCGGGTCGGT 
GACACGGTCA CGCTGCTCAC GCCGGTCGGT CCCGAGCCGA TCGACGTGCT CGACGTCCGT 
TATCCGCCGC CGGACGCGGC TTGA 

 

Protein sequence

MNKAFVKESD GDDDDLDFAQ AAIPPGAKNY ITPAGHKRLR DELLHLIDEA RPDVVKLVSW 
AASNGDRSEN GDYIYGKRRL REIDRRIRFL TKRLDLAEVV DASRQENADQ VFFGATVDYA 
TQDGNEHTVT IVGVDEVDLD RGHVSWISPV ARALLKARVG DTVTLLTPVG PEPIDVLDVR 
YPPPDAA