| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BURPS1106A_3006 |
|---|
| Symbol | |
|---|
| ID | 4900631 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Burkholderia pseudomallei 1106a |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009076 |
|---|
| Strand | - |
|---|
| Start bp | 2943324 |
|---|
| End bp | 2944469 |
|---|
| Gene Length | 1146 bp |
|---|
| Protein Length | 381 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 71% |
|---|
| IMG OID | 640136232 |
|---|
| Product | exonuclease DNA polymerase III subunit epsilon |
|---|
| Protein accession | YP_001067249 |
|---|
| Protein GI | 126455164 |
|---|
| COG category | [L] Replication, recombination and repair |
|---|
| COG ID | [COG0847] DNA polymerase III, epsilon subunit and related 3'-5' exonucleases |
|---|
| TIGRFAM ID | [TIGR00573] exonuclease, DNA polymerase III, epsilon subunit family |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 1 |
|---|
| Plasmid unclonability p-value | 0.00547496 |
|---|
| Plasmid hitchhiking | Yes |
|---|
| Plasmid clonability | hitchhiker |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGTCCGCCT CGCCGCCGCC GCATCCCGCG ATCGACACGC CGCTCGCGTT CGTCGACCTC
GAAACGACCG GCGGATCGGC CGCCGAGCAT CGCATCACCG AAATCGGCGT TGTCGTCGTG
AACGCGAACG GCGTATCGAC ATGGACGACG CTCGTCGATC CGCAGCAGCC GATTCCCCCG
TTCATCCAGC AGCTCACGGG TATCACCGAC GCGATGGTGC GCGGCGCGCC GACGTTTGCC
GACATTGCGG GCGCATTGTT CGAGCGGCTC GACGGCAAAC TTTTCGTCGC GCACAACGCG
AGCTTCGACC GAGGCTTTCT GCGCGCGGAG TTCGAGCGAG CGGGCATCGC ATTCAATCCC
GACGTGCTTT GCACGGTGCG GCTGTCGCGC GCGCTTTTCC CGCGCGAGTC GCGCCATGGG
CTCGACGCGC TGATCGAGCG GCACGCGCTC GCGCCGTCGG CACGCCACCG GGCGCTCGCC
GACGCGGATC TCATCTGGCA GTTCTGGCAA AAGTTGCACG CCGTGATACC GGCCGAGCAA
CTGAGCGAGC AGATCGTGCG CACGACGCGC CGGTTCAGGC TCGCGGGGGC GTTGACGGAA
GCGCATCTGG AAAGCGCGCC CGCCGGCTGT GGCGTCTACG CGCTGTTCGG CGACGGCGAC
GCGCCGCTCT ATGTCGGCCG AAGCGTGCGG GTTCGCCAGC GGCTGCGCGC GCTGCTGACG
GGGGAGCGGC GCTCGTCGAA GGAAACACGG CTCGCGCAGC TCGTGCGGCG GGTCGAATGG
CGCGAGACGG GCGGCGAGCT CGGCGCGCTG CTTGCCGAGG CGGACTGGAT CGCGTCGCTT
GCGCCGTCGT TCAACCGGCG GTCGGACCGC GGCGCGACGG GCGATGCGCA TTGGCCGTTC
GGCGGGCCGG TCGCGTTCGA GGAGCGCGGC GAATCGCGTG TTTTTCATGT GATCGATCAG
TGGCGCTACG TCGGCGCGGC ATCGTCGATC GAGCGGGCGG CGACGCTCGC GGCCGACGCG
CGCGCGGCGG GCGAAGGCGC GCGGAGCGCC GCGCCGGCGG TGCGCCGCAT TCTGCAGACG
CATCTCGCGC GCGGGCTTCA ACTGATTCCG ATTCCGCTCG CGGGCGCCGC GCCTGCCGCC
GCCTAA
|
|---|
| Protein sequence | MSASPPPHPA IDTPLAFVDL ETTGGSAAEH RITEIGVVVV NANGVSTWTT LVDPQQPIPP
FIQQLTGITD AMVRGAPTFA DIAGALFERL DGKLFVAHNA SFDRGFLRAE FERAGIAFNP
DVLCTVRLSR ALFPRESRHG LDALIERHAL APSARHRALA DADLIWQFWQ KLHAVIPAEQ
LSEQIVRTTR RFRLAGALTE AHLESAPAGC GVYALFGDGD APLYVGRSVR VRQRLRALLT
GERRSSKETR LAQLVRRVEW RETGGELGAL LAEADWIASL APSFNRRSDR GATGDAHWPF
GGPVAFEERG ESRVFHVIDQ WRYVGAASSI ERAATLAADA RAAGEGARSA APAVRRILQT
HLARGLQLIP IPLAGAAPAA A
|
|---|
| |