Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | BURPS1106A_2999 |
Symbol | |
ID | 4901827 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Burkholderia pseudomallei 1106a |
Kingdom | Bacteria |
Replicon accession | NC_009076 |
Strand | - |
Start bp | 2938937 |
End bp | 2941273 |
Gene Length | 2337 bp |
Protein Length | 778 aa |
Translation table | 11 |
GC content | 69% |
IMG OID | 640136225 |
Product | TonB-dependent receptor |
Protein accession | YP_001067242 |
Protein GI | 126453144 |
COG category | [P] Inorganic ion transport and metabolism |
COG ID | [COG1629] Outer membrane receptor proteins, mostly Fe transport |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 4 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGTTCCATC AACTTGCCGC GCCCGGCGCG CGCAGGCGGC TCGCGGCCGC CTGCGCCGCG GCGCTCGCCT GGCCCGCCGC CCACGCGGCT TCGACGGCCG CCGCCGTGCC TGCCGATTCA ACGCCGGCCG CCGCCGCGGA GATGACCGCA TCCGGGAAAA CCTTGGATAC CGTCAAGGTC ACCGCGCAGC GCGCCGCGTT CGCGCCCGAC ACGCCCGGCG TCGTCGAGGC GCTCACGCGC GAGCAGATCG ATTCGCACGT CAACGTGACG ACCGAAGACG CGCTCAAGTA CGCGCCGAAC CTGATGGTGC GCCGGCGCTA CATCGGCGAC CGCAATTCAG TGTTCGCCGG CCGAGACTTC AATGAGCTGC AGAGCGCGCG CGGACTCGTC TATGCGGACG GCATCCTGCT GTCCAATCTG CTCGGTTCCA GCTATTCGTA TCCGCCGCGC TGGTCGCTGA TCCAGCCCGA CGACATCGCA CGCGTGGACG TGCTGTATGG CCCGTTTTCC GCGCTCTACC CGGGCAACGC GATCGGCTCG ACCGTGCAGA TCACCACGCA CAAGCCGCAG CGGCTCGAGG CGTCGGTGTC GACGCAGTTC TTCACGCAGC GCTATCGCGA CGGCTACGGC TTCGCCGACA GCTTCGGCGG CAATCACCAG AGCGCGCGCA TCGCCGATCG CGTCGGACGT TTCTGGTATG CGCTGTCGCT CGACCGGCTC GAGAACGACA GCCAGCCGAT GCAATACGCG AGCCCGAACG GCGCGTTCGA TCCGAGGCTC GGCGCACCCG TGCCGGTGAC GGGGGCCGTC TCCGACATCG GGCCGAACGG CCGGCCGCGG ACGATCGTCG GCGCGCAGAC GATCGAGCGC ACCGAGCAGC TCAACGAGAC GTTGCGCTTC GGCTACGCGT TCACCGATCA CGTCGACGCG ACGGTCACGC TCGGCCACTG GGAGAATCAC TACCGGCAGC ACGGCGACAC TTTCCTGCGC GACGCGGCGG GCAACCCGGT GTACGGCGGC AACGTGTCGT TCGGCGGGCG CAACTACACG GTGTCGCCGG GCGCGTTCGC GCCGCAGACG GGCGACCAGG AGAACTGGCT GTACGGGCTC GGGCTCGACG CGCGGCTCGC GTCCGGCTGG AAGCTGTCGG CCACCGCGTC CGCCTACGAG GTGTCGCGCG ACGTGCTGCG CAGCGCGTCC GGCGCGCCGC CCGGCGCCTG GGACGGCGGG CCGGGCACGG TGTCCCATGG CGACGGCACC GGCTGGCGCA CCGTCGACTT GCGCGCGGAG TCGCCCGACG TGCGCGGGCA CCGTTTTTCG TTCGGCTACC ACTTCGATAC GTATTTCCTG CGCAACGCGA CCTACAACAC GGCCGACTGG CAAAACGCGG TGCCGACGAC GCTCGTGAAC CGCTATCGCG GCAACACGCG CACGCAGGCG CTGTATGCAC AGGACGCGTG GCGCGTCGCG CCCGGCTGGC TCGCGACGCT CGGCCTGCGC TACGAGCGCT GGGATGCATA CGGCGGCGAG CTCGGCGGCG CGACCGCGAC GCTCGGCTAC GCGGAGCGCG GCGCGACCGC GTTCTCGCCG AAGCTCTCGC TCGAATGGCA GCCGGCCAGC GCGTGGCGCC TGCGGTTGTC GTTCGCGACG GGCACGCGCT TTCCGACGGT CGCCGAGCTG TTCCAGGGCA CGATCTCGAA CAACGCGATC GTCAACAACA ACCCGAATCT GCAGCCGGAA AAGGCGATCG ACTGGGATTT CACCGCCGAG CGCGACGTCG GCTTCGGCGT CGTGCGCGCG AGCGTGTTCC AGAGCGATCT GCGCAATTCG ATCTACAGCC AGACCACGCT TGCCGGCGCG TCGACGTACA CGAACGTCTC GAACGTCGAC CGCGTGCGGG TGCGCGGCGT CGAGCTCGCG TTCTCGGGGC AGGACGTCGC GCTCAAGGGG CTCGACGTCG ACGCGAACGT GTCCGCGACG AATGCGCAGA CGCTTGCCGA TGCGGCCAAT CCGAACTACG TCGGCGCGCG CTGGCCGCGG ATTCCGCGGA TGCGCGCGAA CCTGCTCGCG TCGTACCGCT TCGACGAGCA TTGGATGACG AGCGTCGGCG TTCGCTATTC GGGGCGGCAG TACAACGCGC TCGACAACAG CGACGTGAAT CCGGGCGTAT ACGGCGGCAC CAGCTCGTTC ATGGTCGTCG ACCTGAAGGC GCGCTATCGG TTCGATCGGC ACTGGCTCGC GTCGTTCGGC ATCGACAACG TGACCGATCG CCGCTACTAC GTGTTCCATC CTTATCCGGG CCGCACTTTT TATGGAGAGT TGAAATGGTC GCTGTGA
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Protein sequence | MFHQLAAPGA RRRLAAACAA ALAWPAAHAA STAAAVPADS TPAAAAEMTA SGKTLDTVKV TAQRAAFAPD TPGVVEALTR EQIDSHVNVT TEDALKYAPN LMVRRRYIGD RNSVFAGRDF NELQSARGLV YADGILLSNL LGSSYSYPPR WSLIQPDDIA RVDVLYGPFS ALYPGNAIGS TVQITTHKPQ RLEASVSTQF FTQRYRDGYG FADSFGGNHQ SARIADRVGR FWYALSLDRL ENDSQPMQYA SPNGAFDPRL GAPVPVTGAV SDIGPNGRPR TIVGAQTIER TEQLNETLRF GYAFTDHVDA TVTLGHWENH YRQHGDTFLR DAAGNPVYGG NVSFGGRNYT VSPGAFAPQT GDQENWLYGL GLDARLASGW KLSATASAYE VSRDVLRSAS GAPPGAWDGG PGTVSHGDGT GWRTVDLRAE SPDVRGHRFS FGYHFDTYFL RNATYNTADW QNAVPTTLVN RYRGNTRTQA LYAQDAWRVA PGWLATLGLR YERWDAYGGE LGGATATLGY AERGATAFSP KLSLEWQPAS AWRLRLSFAT GTRFPTVAEL FQGTISNNAI VNNNPNLQPE KAIDWDFTAE RDVGFGVVRA SVFQSDLRNS IYSQTTLAGA STYTNVSNVD RVRVRGVELA FSGQDVALKG LDVDANVSAT NAQTLADAAN PNYVGARWPR IPRMRANLLA SYRFDEHWMT SVGVRYSGRQ YNALDNSDVN PGVYGGTSSF MVVDLKARYR FDRHWLASFG IDNVTDRRYY VFHPYPGRTF YGELKWSL
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