Gene BURPS1106A_2967 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBURPS1106A_2967 
Symbol 
ID4901329 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia pseudomallei 1106a 
KingdomBacteria 
Replicon accessionNC_009076 
Strand
Start bp2910871 
End bp2912715 
Gene Length1845 bp 
Protein Length614 aa 
Translation table11 
GC content72% 
IMG OID640136193 
ProductTPR repeat-containing protein 
Protein accessionYP_001067211 
Protein GI126452464 
COG category[R] General function prediction only 
COG ID[COG0457] FOG: TPR repeat 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGAATCCG CTTTCGACCG CGCGTTCGCC GCGCACCGCG CAGGCCGGCT CGACGATGCC 
GAGCACGGCT ACCGGGCCGC GCTCGCCGCC AATCCCGCCG ATGCCGATGC GCTGCACCTG
TTCGGGGTGC TGCGCCACCA GCAGGGCCGG CACGAAGAAG CAGCCGACCT CGTCGGCCGC
GCGGTCGGGT TGCGCCCGAA CGACGCCGCG CTGCAACTGA ATCTCGGCAA CGCGCTCAAG
GCGCTCGGCC GGCTCGACGA TGCGATCGAG CGCTTTCGCA ACGCGCTCAC GCTCGCGCCG
GCGTTCCCGC TCGCGCATTA CAACCTCGGC AATGCGTACG CGGCGCAGGA GCGGCACGAC
GACGCGGTCG ACGCGTTCAA GCGTGCGCTC GCGCTCACGC CCGGCGACGC GTCGATCCAC
AACAACCTCG GCAACGCGCT CAACGCGCTC GGCCGGCACG ACGACGCGCT TGAGGCGTTT
CGCCGCGCGC TCGAGCTGCG CCCCGGCCAC GCGGGCGCGC ACAACAATCT CGGGATGGCG
CTCGCCGCGC TTGGTGATAC CGACGCGGCG ATCGCGCACT TTCGCGCGGC GATCGCCGCA
GAGCCGCACT TCGTCGCCGC GCATTTCAAT CTCGGCAACG CGCTCGATGC GATCGGCCAA
CATGCGCAGG CGCAGCATGC GTTCGAAGCC GCGCTCGCGC TGCAGCCGCG CTTCGCGCTT
GCGCTGTTCG GGCTCGCGAA CACGCTCGCG GCGCGCGGCC GCCATCGCGA CGCGCTGCCG
CATTACGAAC GCGCGGTCGG GCTCGATCCG TCGTTCGTGC TCGCATGGCT TAACCTCGGC
ACCGCGCATC ATGCGCTCGG CGCGCACGAA ATGGCGCTGC GCGCGTTCGA TCAGGCGCTG
CGGCTCGATC CGTCGCTCAC GCTCGCGCAA ATGCATCGCG CGGTCACGCT GCTCACGCTG
CGCGATTTCA CGCGCGGCCT GCCCGCGTAC GAAGCGCGGC ATGCGCTGCC GGGCGCGGCG
CCGCTCGGGC CGCTGCCGCG CTGGCAAGGC GAGCCGATCG CGAACCGCAC GCTGCTCGTG
CGCGCCGAGC AGGGCTTCGG CGACACGCTG CAGTTCGTGC GGCTCGTGCC GCTCGCGCGC
GCGCGCTGCG CTCGGCTGAT CCTGCAGGTC CAGCCCGCGC TGCTGCCGCT CATCGCGCCG
ATGGCCGCGC GCTGGCGCGT GAGCGTCGTG TCGGCCGACG CGGCGCGAAC GCCCGCCGCC
GATCTCGTCT GCCCGCTGTT GAGCCTGCCG TTCGCGCTCG GGCTCGAATA CGACGCGATT
CCGTCGCGCA CCCCGTATCT CGACGTGCCC GACGCCGCGC GCCGCCGCTT TCGCGGCTCG
CTCGGCGGGC AGGCCAAACG CAAGTTCGGC ATCGCCTGGT CCGGCAGCGC GCCGGTGCAG
GACAATCGCG CGCTACCGCT CGATGCGCTT GCCCCGCTCT TCGCGCTCGC CGGCATCGAC
TGGATCGTGC TGCAGCCGAC GCTGTCGGAT AGCGAGCACG CGGCGCTCGA CGCGCATCCG
GATGCGGCTC GCATCCATCG GCTCGAAGGC CTGACCGATT TCGCGGCAAC GGCCGCGCTC
GTCGATCGGC TCGACGGCGT CGTCGCGATC GACACCGCGG TCGCCCACCT CGCCGGCGCG
CTCGGCAAGC CGCTGTGGCT GATGCTGCCC GTCGCCGCCG ACTGGCGCTG GAGCACGGGC
GACGACAGTG CGTGGTATCC GCGCGCGCGG CTCGTCCGGC AATCGGAGCC GGGGCGGTGG
GACGACGTGG TCGCGACCGT TGCGGGCGAA ATCGCGCACG GATGA
 
Protein sequence
MESAFDRAFA AHRAGRLDDA EHGYRAALAA NPADADALHL FGVLRHQQGR HEEAADLVGR 
AVGLRPNDAA LQLNLGNALK ALGRLDDAIE RFRNALTLAP AFPLAHYNLG NAYAAQERHD
DAVDAFKRAL ALTPGDASIH NNLGNALNAL GRHDDALEAF RRALELRPGH AGAHNNLGMA
LAALGDTDAA IAHFRAAIAA EPHFVAAHFN LGNALDAIGQ HAQAQHAFEA ALALQPRFAL
ALFGLANTLA ARGRHRDALP HYERAVGLDP SFVLAWLNLG TAHHALGAHE MALRAFDQAL
RLDPSLTLAQ MHRAVTLLTL RDFTRGLPAY EARHALPGAA PLGPLPRWQG EPIANRTLLV
RAEQGFGDTL QFVRLVPLAR ARCARLILQV QPALLPLIAP MAARWRVSVV SADAARTPAA
DLVCPLLSLP FALGLEYDAI PSRTPYLDVP DAARRRFRGS LGGQAKRKFG IAWSGSAPVQ
DNRALPLDAL APLFALAGID WIVLQPTLSD SEHAALDAHP DAARIHRLEG LTDFAATAAL
VDRLDGVVAI DTAVAHLAGA LGKPLWLMLP VAADWRWSTG DDSAWYPRAR LVRQSEPGRW
DDVVATVAGE IAHG