Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | BURPS1106A_2967 |
Symbol | |
ID | 4901329 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Burkholderia pseudomallei 1106a |
Kingdom | Bacteria |
Replicon accession | NC_009076 |
Strand | + |
Start bp | 2910871 |
End bp | 2912715 |
Gene Length | 1845 bp |
Protein Length | 614 aa |
Translation table | 11 |
GC content | 72% |
IMG OID | 640136193 |
Product | TPR repeat-containing protein |
Protein accession | YP_001067211 |
Protein GI | 126452464 |
COG category | [R] General function prediction only |
COG ID | [COG0457] FOG: TPR repeat |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 5 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGAATCCG CTTTCGACCG CGCGTTCGCC GCGCACCGCG CAGGCCGGCT CGACGATGCC GAGCACGGCT ACCGGGCCGC GCTCGCCGCC AATCCCGCCG ATGCCGATGC GCTGCACCTG TTCGGGGTGC TGCGCCACCA GCAGGGCCGG CACGAAGAAG CAGCCGACCT CGTCGGCCGC GCGGTCGGGT TGCGCCCGAA CGACGCCGCG CTGCAACTGA ATCTCGGCAA CGCGCTCAAG GCGCTCGGCC GGCTCGACGA TGCGATCGAG CGCTTTCGCA ACGCGCTCAC GCTCGCGCCG GCGTTCCCGC TCGCGCATTA CAACCTCGGC AATGCGTACG CGGCGCAGGA GCGGCACGAC GACGCGGTCG ACGCGTTCAA GCGTGCGCTC GCGCTCACGC CCGGCGACGC GTCGATCCAC AACAACCTCG GCAACGCGCT CAACGCGCTC GGCCGGCACG ACGACGCGCT TGAGGCGTTT CGCCGCGCGC TCGAGCTGCG CCCCGGCCAC GCGGGCGCGC ACAACAATCT CGGGATGGCG CTCGCCGCGC TTGGTGATAC CGACGCGGCG ATCGCGCACT TTCGCGCGGC GATCGCCGCA GAGCCGCACT TCGTCGCCGC GCATTTCAAT CTCGGCAACG CGCTCGATGC GATCGGCCAA CATGCGCAGG CGCAGCATGC GTTCGAAGCC GCGCTCGCGC TGCAGCCGCG CTTCGCGCTT GCGCTGTTCG GGCTCGCGAA CACGCTCGCG GCGCGCGGCC GCCATCGCGA CGCGCTGCCG CATTACGAAC GCGCGGTCGG GCTCGATCCG TCGTTCGTGC TCGCATGGCT TAACCTCGGC ACCGCGCATC ATGCGCTCGG CGCGCACGAA ATGGCGCTGC GCGCGTTCGA TCAGGCGCTG CGGCTCGATC CGTCGCTCAC GCTCGCGCAA ATGCATCGCG CGGTCACGCT GCTCACGCTG CGCGATTTCA CGCGCGGCCT GCCCGCGTAC GAAGCGCGGC ATGCGCTGCC GGGCGCGGCG CCGCTCGGGC CGCTGCCGCG CTGGCAAGGC GAGCCGATCG CGAACCGCAC GCTGCTCGTG CGCGCCGAGC AGGGCTTCGG CGACACGCTG CAGTTCGTGC GGCTCGTGCC GCTCGCGCGC GCGCGCTGCG CTCGGCTGAT CCTGCAGGTC CAGCCCGCGC TGCTGCCGCT CATCGCGCCG ATGGCCGCGC GCTGGCGCGT GAGCGTCGTG TCGGCCGACG CGGCGCGAAC GCCCGCCGCC GATCTCGTCT GCCCGCTGTT GAGCCTGCCG TTCGCGCTCG GGCTCGAATA CGACGCGATT CCGTCGCGCA CCCCGTATCT CGACGTGCCC GACGCCGCGC GCCGCCGCTT TCGCGGCTCG CTCGGCGGGC AGGCCAAACG CAAGTTCGGC ATCGCCTGGT CCGGCAGCGC GCCGGTGCAG GACAATCGCG CGCTACCGCT CGATGCGCTT GCCCCGCTCT TCGCGCTCGC CGGCATCGAC TGGATCGTGC TGCAGCCGAC GCTGTCGGAT AGCGAGCACG CGGCGCTCGA CGCGCATCCG GATGCGGCTC GCATCCATCG GCTCGAAGGC CTGACCGATT TCGCGGCAAC GGCCGCGCTC GTCGATCGGC TCGACGGCGT CGTCGCGATC GACACCGCGG TCGCCCACCT CGCCGGCGCG CTCGGCAAGC CGCTGTGGCT GATGCTGCCC GTCGCCGCCG ACTGGCGCTG GAGCACGGGC GACGACAGTG CGTGGTATCC GCGCGCGCGG CTCGTCCGGC AATCGGAGCC GGGGCGGTGG GACGACGTGG TCGCGACCGT TGCGGGCGAA ATCGCGCACG GATGA
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Protein sequence | MESAFDRAFA AHRAGRLDDA EHGYRAALAA NPADADALHL FGVLRHQQGR HEEAADLVGR AVGLRPNDAA LQLNLGNALK ALGRLDDAIE RFRNALTLAP AFPLAHYNLG NAYAAQERHD DAVDAFKRAL ALTPGDASIH NNLGNALNAL GRHDDALEAF RRALELRPGH AGAHNNLGMA LAALGDTDAA IAHFRAAIAA EPHFVAAHFN LGNALDAIGQ HAQAQHAFEA ALALQPRFAL ALFGLANTLA ARGRHRDALP HYERAVGLDP SFVLAWLNLG TAHHALGAHE MALRAFDQAL RLDPSLTLAQ MHRAVTLLTL RDFTRGLPAY EARHALPGAA PLGPLPRWQG EPIANRTLLV RAEQGFGDTL QFVRLVPLAR ARCARLILQV QPALLPLIAP MAARWRVSVV SADAARTPAA DLVCPLLSLP FALGLEYDAI PSRTPYLDVP DAARRRFRGS LGGQAKRKFG IAWSGSAPVQ DNRALPLDAL APLFALAGID WIVLQPTLSD SEHAALDAHP DAARIHRLEG LTDFAATAAL VDRLDGVVAI DTAVAHLAGA LGKPLWLMLP VAADWRWSTG DDSAWYPRAR LVRQSEPGRW DDVVATVAGE IAHG
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