| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BURPS1106A_2947 |
|---|
| Symbol | aroA |
|---|
| ID | 4899747 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Burkholderia pseudomallei 1106a |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009076 |
|---|
| Strand | - |
|---|
| Start bp | 2889366 |
|---|
| End bp | 2891615 |
|---|
| Gene Length | 2250 bp |
|---|
| Protein Length | 749 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 71% |
|---|
| IMG OID | 640136173 |
|---|
| Product | bifunctional prephenate dehydrogenase/3-phosphoshikimate 1-carboxyvinyltransferase |
|---|
| Protein accession | YP_001067192 |
|---|
| Protein GI | 126453178 |
|---|
| COG category | [E] Amino acid transport and metabolism |
|---|
| COG ID | [COG0128] 5-enolpyruvylshikimate-3-phosphate synthase
[COG0287] Prephenate dehydrogenase |
|---|
| TIGRFAM ID | [TIGR01356] 3-phosphoshikimate 1-carboxyvinyltransferase |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 6 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | GTGTCAGGCT TTTATTTCGA CAAACTGGTG ATTTTCGGCG TCGGGCTGAT CGGCGGCTCG
CTCGCGCTCG CGTTGCGCGA AGGCGCGTCG GGCGGCCGGC GCGAGGTGGT GGGCGTCGGC
CGCTCGTCGG CGTCGATCGG GCGCGCGCTC GCGTTGCGCG TGATCGATCG CGCGGCGGCG
CTCGACGACG ATGCGCAACT GCGCGATGCG CTCGCGGGCG CGGACCTCGT GCTGCTCGCC
GCGCCCGTCG CTCAGACGGG CCCGCTGCTT GCGCGGATCG CGCCGTTTCT CGATGCATCG
ACGATCGTCA CCGACGCGGG CAGCACGAAG TCGGACGTCG TCGCGGCCGC GCGCGCGGCG
CTCGGCGCGC GGATCGGCCA GTTCGTGCCG GGCCACCCGA TCGCCGGGCG CGAATCGAGC
GGCGTCGACG CGGCGCTCGC CGATCTGTAC GTCGGCCGCA ACGTCGTGCT ATGCGCGCTG
CCGGAGAACG CGCCCGACGC GCTCGCGCGC GTCGAAGCGA TGTGGCGCGC GGCGCGCGCC
GACGTGCGCG CGATGAGCGC CGAGCAGCAC GACCGCGTGT TCGCGGCGGT GAGCCACCTG
CCGCACGTGC TGTCGTTCGC GCTCGTCGAG CAGATTCTCG GCGAATCCGA CGCCGAGCTG
AAGTTCTCGT ATGCGGCGGG CGGTTTCCGC GATTTCACGC GCATCGCCGC GTCGAGCCCC
GAAATGTGGC GCGACGTCTG CCTCGCGAAC CGCGCGGCGC TCCTCGACGA GCTCGACGCG
TATACCGCGG TGCTCGCGCG TCTGCGCGCG GCGATCGACG CGGGTGACGG CGCCGCGCTC
GAGGCCGTGT TCGCGCGCTC GCGCGCCGCG CGCGCCGCCT GGCGCGAGCG CGGCGCGAAG
CCCGCCCCCG CTGTCCGTTC AGACACTTCC GGAACAGGAT CTCACATGGA ACATCTCGAT
CTCGGCCCGT TCTCCCATGC GCAAGGCACG GTGCGCCTGC CCGGCTCGAA GAGCATTTCG
AACCGCGTGC TGCTGCTCGC GGCGCTCGCG GAGGGCGAGA CGACCGTCAC GAACCTGCTC
GATTCCGACG ATACGCGCGT GATGCTCGAT GCGTTGACGA AGCTCGGCGT GAAGCTGTCG
CGCGACGGCG GCACCTGCGT CGTCGGCGGC ACGCGCGGCG CGTTCACCGC GAAGACCGCC
GATCTCTTCC TCGGCAACGC GGGCACCGCG GTGCGGCCGC TGACGGCGGC GCTCGCGGTC
AACGGCGGCG AGTACCGGAT TCACGGGGTG CCGCGGATGC ACGAGCGCCC GATCGGCGAC
CTCGTCGACG GGTTGCGCCA GATCGGCGCG CGGATCGACT ACGAGGGCAA CGAGGGCTTC
CCGCCGCTCA GGATCCGGCC CGCGACGATT TCGGTCGACG CGCCGATCCG CGTGCGCGGC
GACGTGTCGA GCCAGTTCCT GACCGCGCTG CTGATGACGC TGCCGCTCGT GAAGGCGAAG
GATGGCGCGA GCGTCGTCGA GATCGACGGC GAGCTGATCT CTAAGCCGTA CATCGAGATC
ACGATCAAGC TGATGGCGCG CTTCGGCGTG ACGGTGGAGC GCGACGGCTG GCAGCGCTTC
ACGGTGCCGG CGGGCGTGCG CTACCGGTCG CCCGGCACGA TCATGGTCGA GGGCGACGCG
TCGTCGGCGT CGTATTTCCT CGCGGCGGGC GCGCTCGGCG GCGGGCCGCT GCGCGTCGAG
GGCGTCGGCC GCGCGAGCAT CCAGGGCGAC GTCGGCTTCG CGAACGCGCT GATGCAGATG
GGCGCGAACG TGACGATGGG CGACGACTGG ATCGAGGTGC GCGGCATCGG CCATGACCAC
GGCAGGCTCG CGCCGATCGA CATGGACTTC AACCTGATTC CGGACGCCGC GATGACGATC
GCGGTCGCCG CGCTGTTCGC CGACGGCCCG AGCACGCTGC GCAACATCGG CAGCTGGCGC
GTGAAGGAGA CCGACCGGAT CGCCGCGATG GCGACCGAGC TGCGCAAGGT CGGCGCGACG
GTCGAAGAGG GCGCGGACTA CCTCGTCGTG ACTCCGCCCG CGCAACTCAC GCCGAATGCG
TCGATCGACA CCTACGACGA TCACCGGATG GCGATGTGCT TTTCGCTCGT GAGCCTGGGC
GGCGTGCCCG TGCGCATCAA CGATCCGAAG TGCGTCGGCA AGACGTTCCC CGACTATTTC
GACCGTTTCC TCGCGCTCGC GAACGCGTGA
|
|---|
| Protein sequence | MSGFYFDKLV IFGVGLIGGS LALALREGAS GGRREVVGVG RSSASIGRAL ALRVIDRAAA
LDDDAQLRDA LAGADLVLLA APVAQTGPLL ARIAPFLDAS TIVTDAGSTK SDVVAAARAA
LGARIGQFVP GHPIAGRESS GVDAALADLY VGRNVVLCAL PENAPDALAR VEAMWRAARA
DVRAMSAEQH DRVFAAVSHL PHVLSFALVE QILGESDAEL KFSYAAGGFR DFTRIAASSP
EMWRDVCLAN RAALLDELDA YTAVLARLRA AIDAGDGAAL EAVFARSRAA RAAWRERGAK
PAPAVRSDTS GTGSHMEHLD LGPFSHAQGT VRLPGSKSIS NRVLLLAALA EGETTVTNLL
DSDDTRVMLD ALTKLGVKLS RDGGTCVVGG TRGAFTAKTA DLFLGNAGTA VRPLTAALAV
NGGEYRIHGV PRMHERPIGD LVDGLRQIGA RIDYEGNEGF PPLRIRPATI SVDAPIRVRG
DVSSQFLTAL LMTLPLVKAK DGASVVEIDG ELISKPYIEI TIKLMARFGV TVERDGWQRF
TVPAGVRYRS PGTIMVEGDA SSASYFLAAG ALGGGPLRVE GVGRASIQGD VGFANALMQM
GANVTMGDDW IEVRGIGHDH GRLAPIDMDF NLIPDAAMTI AVAALFADGP STLRNIGSWR
VKETDRIAAM ATELRKVGAT VEEGADYLVV TPPAQLTPNA SIDTYDDHRM AMCFSLVSLG
GVPVRINDPK CVGKTFPDYF DRFLALANA
|
|---|
| |