Gene BURPS1106A_2942 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBURPS1106A_2942 
Symbol 
ID4901305 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia pseudomallei 1106a 
KingdomBacteria 
Replicon accessionNC_009076 
Strand
Start bp2884717 
End bp2885886 
Gene Length1170 bp 
Protein Length389 aa 
Translation table11 
GC content66% 
IMG OID640136168 
Producttetratricopeptide repeat protein 
Protein accessionYP_001067187 
Protein GI126453989 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG2956] Predicted N-acetylglucosaminyl transferase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGATCTCG ATTTCTGGTG GCTGCTCGCC ATTCCCGTCG CGTTCGCGCT CGGCTGGATG 
GCGTCGCGCT ACGACCTCAA CAAGCTGCTG TCCGAGAGCG CGAACCTGCC GCGCTCGTAT
TTTCGCGGCC TGAATTTCCT GCTGAACGAA CAGCCGGACA AAGCGATCGA TGCGTTCATC
GAAGTCGCGA AGCTCGATCC CGAAACGGTC GAGCTGCACT TCGCGCTCGG CAACCTGTTT
CGCCGCCGCG GCGAGACGGA CCGGGCGATC CGCGTCCATC AGAATCTGCT GAGCCGCAAC
GATCTGCCCG TGAGCGAGCG CGACCACGCG CTCTTCGAGC TCGGCCAGGA CTTCCTGAAG
GCGGGCCTGC TCGATCGTGC GGAGGAGACG TTCCACATGC TGGCCGAGGG GGACTACGCG
CTCGACGCGC AGCGCGCACT CCTCACGATC TACGAGATCG AGAAGGACTG GACCAAGTCG
ATCGACACCG CGGCGAGGAT CGAAGCGATG GGTGCGCCGC GTCTCACGAC GGAGATCTCG
CAATTCCATT GCGAGCTTGC TCAGGACGCG CTGCAGCGCA AGAGCGCCGA GCTCGCGGCC
GAGCATCTGC GCGACGCGCT CGCGGTGAAT CCGCAGAACG CGCGCGCGGC GATCCTGTCG
GGCGATACGG CCGCCGCGGC CGGCGACCAT CGCGCGGCGA TCGAGCACTG GCGCCGGATC
GAGACGCAGA ATCCCGCTTA TCTGCCGCTC GTCGCCGACA AGCTGATGAA ATCGTACGCG
GCGCTCGATC GGGCGGCCGA GGGCGCCGAG CTGCTGACGG GCTATGCGCA GCGCTATCCG
TCGAACGATC TGCTCGATGT CGTCTATCAG TATGTCGCGC AACTGCGCGG CAACGACGTC
GCGCATGCGC TCGCGCGCTC GCAGATGGAA AAGGCGCCGA ACCTCTCCGG CATGCTGCAC
CTGCTCGACG CGCAGATCGC CGCGGCCGAC GAACCGCGGC GATCCGAGCT CGAGATGATG
CGCGCGCTCG TCAAGCAGCG CACCAAGAAT TTGCCGCGAT ATACATGCCA GAATTGCGGT
TTCCGGGCGC GCCTGTTCTA TTGGCAGTGC CCCGGATGCA GCGGATGGGA AACCTATGCG
CCGCGGCGCG TCGAGCCCGC CGTTGCGTAA
 
Protein sequence
MDLDFWWLLA IPVAFALGWM ASRYDLNKLL SESANLPRSY FRGLNFLLNE QPDKAIDAFI 
EVAKLDPETV ELHFALGNLF RRRGETDRAI RVHQNLLSRN DLPVSERDHA LFELGQDFLK
AGLLDRAEET FHMLAEGDYA LDAQRALLTI YEIEKDWTKS IDTAARIEAM GAPRLTTEIS
QFHCELAQDA LQRKSAELAA EHLRDALAVN PQNARAAILS GDTAAAAGDH RAAIEHWRRI
ETQNPAYLPL VADKLMKSYA ALDRAAEGAE LLTGYAQRYP SNDLLDVVYQ YVAQLRGNDV
AHALARSQME KAPNLSGMLH LLDAQIAAAD EPRRSELEMM RALVKQRTKN LPRYTCQNCG
FRARLFYWQC PGCSGWETYA PRRVEPAVA