| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BURPS1106A_2940 |
|---|
| Symbol | |
|---|
| ID | 4902162 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Burkholderia pseudomallei 1106a |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009076 |
|---|
| Strand | - |
|---|
| Start bp | 2882241 |
|---|
| End bp | 2883227 |
|---|
| Gene Length | 987 bp |
|---|
| Protein Length | 328 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 70% |
|---|
| IMG OID | 640136166 |
|---|
| Product | putative rfaE protein |
|---|
| Protein accession | YP_001067185 |
|---|
| Protein GI | 126454168 |
|---|
| COG category | [M] Cell wall/membrane/envelope biogenesis |
|---|
| COG ID | [COG2870] ADP-heptose synthase, bifunctional sugar kinase/adenylyltransferase |
|---|
| TIGRFAM ID | [TIGR02198] rfaE bifunctional protein, domain I |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 9 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGTCGAGCC CTTCTCTTCC GAGCGCGGAT AAGCGCGCAT CGCTTGCCGC GACCGCGCGC
GCGGTGTCGC GCGAGCAGAT CGCGAAGTCG CGCGTGCTTG TCGTCGGCGA CGTGATGCTC
GATCGCTACT GGTTCGGCAA CGTCAACCGG ATCTCGCCCG AGGCGCCCGT GCCCGTCGTT
CACGTGCAGC GGCAGGAAGA GCGCCTGGGC GGCGCGGCGA ACGTCGCGCG CAATGCGGTG
ACGCTCGGCG GCCAGGCGGG CCTGCTGTGC GTCGTCGGGC GCGACGAGCC GGGCGAGCGC
ATCGTCGAGC TGCTCGGCGA GAGCGGCGTG ACGCCGTATC TCGAGCGCGA TCCGTCGCTG
CCGACCACGA TCAAGCTGCG CGTGCTCGCG CAGCAGCAGC AATTACTGCG CGTGGACTTC
GAGGCGTCGC CGACGCACGA GGTGCTGCTC GCGGGCCTCG CGCGCTTCGA CGCGCTGCTG
CCGTCGTACG ACGTCGTGCT GATGTCCGAC TACGCGAAGG GCGGCCTCAC GCACGTGACG
ACGATGATCG CGAAGGCGCG CGCGGCGGGC AAGCCCGTGC TCGTCGATCC GAAGGGCGCC
GACTGGGCGC GTTATCGCGG CGCGTCGCTG ATCACGCCGA ACCGCGCGGA GCTGCGCGAG
GTCGTCGGGC GGTGGACGTC CGAGGACGAT CTGCGCGCGC GCGTCACGAA GCTGCGCGAA
GCGCTCGCGT TCGACGCGCT GCTGCTCACG CGCTCGGAAG AGGGGATGAC GCTCTTCTCG
CACGAAGGCG AGCTGCACGT GAGCGCGCTC GCGCGCGAAG TGTACGATGT GTCGGGCGCG
GGCGACACGG TGATCGCGAC CGTCGCGACG ATGCTCGGCG CGGGATTGCC GCTCGTCGAG
GCGGTGGTGC TCGCGAATCG CGCGGCGGGC ATCGTGGTCG GCAAGCTCGG CACCGCGACC
GTCGAGTACG ACGAACTGTT TCATTGA
|
|---|
| Protein sequence | MSSPSLPSAD KRASLAATAR AVSREQIAKS RVLVVGDVML DRYWFGNVNR ISPEAPVPVV
HVQRQEERLG GAANVARNAV TLGGQAGLLC VVGRDEPGER IVELLGESGV TPYLERDPSL
PTTIKLRVLA QQQQLLRVDF EASPTHEVLL AGLARFDALL PSYDVVLMSD YAKGGLTHVT
TMIAKARAAG KPVLVDPKGA DWARYRGASL ITPNRAELRE VVGRWTSEDD LRARVTKLRE
ALAFDALLLT RSEEGMTLFS HEGELHVSAL AREVYDVSGA GDTVIATVAT MLGAGLPLVE
AVVLANRAAG IVVGKLGTAT VEYDELFH
|
|---|
| |