| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BURPS1106A_2871 |
|---|
| Symbol | |
|---|
| ID | 4900340 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Burkholderia pseudomallei 1106a |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009076 |
|---|
| Strand | - |
|---|
| Start bp | 2825699 |
|---|
| End bp | 2827207 |
|---|
| Gene Length | 1509 bp |
|---|
| Protein Length | 502 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 66% |
|---|
| IMG OID | 640136097 |
|---|
| Product | putative transporter |
|---|
| Protein accession | YP_001067118 |
|---|
| Protein GI | 126453505 |
|---|
| COG category | [P] Inorganic ion transport and metabolism |
|---|
| COG ID | [COG1055] Na+/H+ antiporter NhaD and related arsenite permeases |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 2 |
|---|
| Plasmid unclonability p-value | 0.104382 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | GTGACGCGTG ATGCGGCCGC CGCCGCGTCA CGCGCCGTAT CCATTCGCAT TTCAAGAGGA
ATTCACATGA AACGACATGC CGCCTGGGCG GGCATGGCGC TGGGAGGCGC ATTAGGCGCC
GCGCCCGCGC TCGCATCGGC CGCAACGCTC GACGGTGCCG CGCTTTCCGC GTTCTGGGCG
GTTCCGTTCG CCGGCATCCT GTTGTCGATC GCGGTCTTTC CGCTGATCGC GCCGGTGTTC
TGGCATCACC ATTTCGGCAA GATCGCGGCG GCGTGGGCGG TTGCGTTCCT GGTGCCGTTC
GCCGCGACGT TCGGCTTCGG CACCGCGTTC GGCACGCTGA TGCACGCGCT GTTCGAGGAA
TACATCCCGT TCATCGTGCT GCTGAGCGCG CTGTATACGG TCGCGGGCGG TATCTGCGTG
CGCGGCAACC TGCACGGCAC GCCCAGGCTC AATACGGGCA TCCTCGCGCT CGGCACCGTG
CTCGCGAGCG TGATGGGCAC CACGGGCGCC GCGATGCTGC TGATCCGTCC GCTCCTGCGC
GCGAACGACA ATCGCAAGCA CGTCGTGCAC GTCGTCGTGT TCTTCATCTT TCTCGTGGCG
AACGCGGGCG GCTCGCTGTC GCCGCTCGGC GATCCGCCGC TCTTCCTCGG CTTTCTGAAC
GGCGTCGATT TCTTCTGGAC GACGATCCAT CTCGCGCTGC CGATGCTGTT CATCTGCGCG
ATCCTGCTCA CGCTCTTCTT CGTGCTCGAT ACCTACTTCT ATCGAAAGGG CGGCGAGGAA
GGCAAGCCGT TCCTCGATCC GACGCCCGAT TCGCACGGCA TGTCGATCGA GGGCAAGGTC
AATTTCGTGC TGCTCGGTGC GGTGATCGCG CTCGTGCTGA TGAGCGGCCT CTGGAAGCCG
GGCATCGCGT TCGATCTGTT CGGCACGCAC GTCGCGCTGC AGAATGCGGT GCGCGACGTC
GCGCTCGTCG CGGTCGCGCT CGTGTCGCTC GCGGTCACGC CGCGCTCGGC GCGCGAGGGC
AACGCGTTCA ACTGGGCGCC GATCGAGGAG GTCGCGAAGC TGTTCGCGGG CATCTTCGTG
ACGATCGCGC CCGTGATCGT GATTCTGCGC GCGGGCGGCG ACGGCGTGTT CGCGCCGATC
GTCCATCTCG TCACGGGCGC CGACGGCAAG CCGGTCGACG CGATGTACTT CTGGGCGACG
GGCGTGCTCT CGTCGTTCCT CGACAACGCG CCGACCTATC TCGTGTTCTT CAATCTCGCG
GGCGGCGATG CGCAGACGCT GATGACGACG GGGGCGACGA CGCTCGCGGC GATCTCGGCG
GGCGCCGTGT TCATGGGCGC GAACAGCTAC ATCGGCAACG CGCCGAATTT CATGGTGAAG
GCGATCGCCG AGTCGCGCGG CGTGCGGATG CCGAGCTTCT TCGCGTACCT CGGCTGGGCG
CTCGCGATTC TCGTGCCGGT GTTCCTGCTG ACGACGTGGG TGTTCTTCAG CGCTCAGGCG
GCGCAATGA
|
|---|
| Protein sequence | MTRDAAAAAS RAVSIRISRG IHMKRHAAWA GMALGGALGA APALASAATL DGAALSAFWA
VPFAGILLSI AVFPLIAPVF WHHHFGKIAA AWAVAFLVPF AATFGFGTAF GTLMHALFEE
YIPFIVLLSA LYTVAGGICV RGNLHGTPRL NTGILALGTV LASVMGTTGA AMLLIRPLLR
ANDNRKHVVH VVVFFIFLVA NAGGSLSPLG DPPLFLGFLN GVDFFWTTIH LALPMLFICA
ILLTLFFVLD TYFYRKGGEE GKPFLDPTPD SHGMSIEGKV NFVLLGAVIA LVLMSGLWKP
GIAFDLFGTH VALQNAVRDV ALVAVALVSL AVTPRSAREG NAFNWAPIEE VAKLFAGIFV
TIAPVIVILR AGGDGVFAPI VHLVTGADGK PVDAMYFWAT GVLSSFLDNA PTYLVFFNLA
GGDAQTLMTT GATTLAAISA GAVFMGANSY IGNAPNFMVK AIAESRGVRM PSFFAYLGWA
LAILVPVFLL TTWVFFSAQA AQ
|
|---|
| |