| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BURPS1106A_2852 |
|---|
| Symbol | fabD |
|---|
| ID | 4903071 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Burkholderia pseudomallei 1106a |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009076 |
|---|
| Strand | - |
|---|
| Start bp | 2805935 |
|---|
| End bp | 2806867 |
|---|
| Gene Length | 933 bp |
|---|
| Protein Length | 310 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 69% |
|---|
| IMG OID | 640136078 |
|---|
| Product | malonyl CoA-acyl carrier protein transacylase |
|---|
| Protein accession | YP_001067099 |
|---|
| Protein GI | 126452756 |
|---|
| COG category | [I] Lipid transport and metabolism |
|---|
| COG ID | [COG0331] (acyl-carrier-protein) S-malonyltransferase |
|---|
| TIGRFAM ID | [TIGR00128] malonyl CoA-acyl carrier protein transacylase |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 3 |
|---|
| Plasmid unclonability p-value | 0.0331918 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAAATTCG CATTCGTTTT TCCGGGCCAG GGCTCGCAAT CGGTCGGCAT GCTCAATGCA
TTCGCCGACG TCGCCGTCGT GCGCGAGACG CTCGACGAAG CGTCCGATGC GCTTGGCCAG
GATATCGGCA AGCTGATCGC CGACGGCCCG GCCGACGAAC TCAATCTGAC GACGAATACG
CAACCCGTGA TGCTGACGGC CGCGTACGCG TGCTATCGCG CGTGGCAGCA GGCGGGCGGC
GCGCAGCCGT CGATCGTCGC GGGCCACAGC CTCGGCGAAT ACACGGCGCT CGTCGCCGCG
GGCGCGATCG CGTTTCGCGA CGCGCTGCCG CTCGTGCGCT TTCGCGCGCA GGCGATGCAG
ACGGCCGTGC CCGTCGGCGT GGGCGGCATG GCGGCGATTC TCGGGCTCGA CGACGACACG
GTGCGCGCGG TGTGCGCCGA GGCGTCGGCG ACGGGCGTCG TCGAAGCGGT GAACTTCAAC
GCGCCCGCGC AGGTCGTGAT CGCGGGCACG AAGGCGGGCA TCGAGAAGGC GTGCGAGATC
GCGAAGGCGA AGGGCGCGAA GCGCGCGCTG CCGCTGCCGG TGTCGGCGCC GTTCCATTCG
TCGCTGCTCA AGCCCGCGTC GGACAAGCTG CGCGAATATC TCGCGGGCGT CGACGTGAAG
GCGCCGAAGA TTTCCGTCGT CAACAACATC GACGTCGCGG TGGTGTCCGA TCCCGCGGCG
ATCAAGGATG CGCTCGTGCG CCAGGCGGCG GGCCCCGTGC GCTGGGTCGA GTGCGTGCAG
CACATCGCCC GCGAGGGCGT GACGCACGTG TTCGAGTGCG GTCCGGGCAA GGTGCTCGCC
GGCCTCACGA AACGCATCGA CGGCAATCTG GTCGGCGCGT CGGTGTTCGA TCCGGCGTCG
CTCGACGAAG CGCTCAAGCT CGCCGCCGCC TGA
|
|---|
| Protein sequence | MKFAFVFPGQ GSQSVGMLNA FADVAVVRET LDEASDALGQ DIGKLIADGP ADELNLTTNT
QPVMLTAAYA CYRAWQQAGG AQPSIVAGHS LGEYTALVAA GAIAFRDALP LVRFRAQAMQ
TAVPVGVGGM AAILGLDDDT VRAVCAEASA TGVVEAVNFN APAQVVIAGT KAGIEKACEI
AKAKGAKRAL PLPVSAPFHS SLLKPASDKL REYLAGVDVK APKISVVNNI DVAVVSDPAA
IKDALVRQAA GPVRWVECVQ HIAREGVTHV FECGPGKVLA GLTKRIDGNL VGASVFDPAS
LDEALKLAAA
|
|---|
| |