| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BURPS1106A_2848 |
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| Symbol | rpoE |
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| ID | 4900480 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia pseudomallei 1106a |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009076 |
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| Strand | - |
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| Start bp | 2802167 |
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| End bp | 2803345 |
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| Gene Length | 1179 bp |
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| Protein Length | 392 aa |
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| Translation table | 11 |
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| GC content | 69% |
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| IMG OID | 640136074 |
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| Product | RNA polymerase sigma factor RpoE |
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| Protein accession | YP_001067095 |
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| Protein GI | 126451887 |
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| COG category | [K] Transcription |
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| COG ID | [COG1595] DNA-directed RNA polymerase specialized sigma subunit, sigma24 homolog |
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| TIGRFAM ID | [TIGR02937] RNA polymerase sigma factor, sigma-70 family
[TIGR02939] RNA polymerase sigma factor RpoE |
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | TTGACGGAGC CGTTCCATGC CGCATCGGCA GGCACGCAGC ACGTCGTGCT GCGCGCGTCG
GCGTGCCTGC GCGTCGCGTG CGCGCTGTTC GTGCCGGCCG TCGGCGCGGC GCTCTATGCG
TGCGCCGCGC CGCTCGTCGG CGGCGGCGGG GCGGCGGCAC TCGCGGGGCT CGCCGCGGCG
CTCGTCGCGC TGCGTGCGCG GGCCGCGTGC GTGCGGCATC AGCCGGCGGC GTTGCTGATC
GACGCCGGCG CGGGCGTGCT CGCGGCGTTC GATCGCGATG GGCGGCGCCT CGCGCGCGGG
CAGATCGCCG GCTGCACGCA ATGGAGCGAT CTGCTTGTCG TGCTGAGGGT GCAGGGCCGC
GGCCGGCGCG TGACGCCGCT CGTCATTCCG GCCGATGCGG TCGACGCGGC CGTGTTCCGC
GCGCTCTGCG TGCTGGGCCG GCGGGCCGCG CGCGGGGCGC TCGCGGCGGC ATGGCGCCCG
CGCGGCAGGC CGCTTCCGGT CGAAAACGCC CATGAGCGCC TCGAGCGGGA ACGTTACAAT
AGCGCTCCGC GTTGCTTCCC TCGTTTACGG ATTTGTCAGG TGAGTGAAAA AGAAATCGAT
CAGGTACTGG TCGAACGCGT ACAGAATGGC GACAAGGCGG CGTTCGAACT CCTGGTCTCC
AAATACCACC GCAAGATCAT CCGGCTGATC TCGCGCCTCG TGCGGGATCC CGCGGAGGTC
GAGGACGTGG CCCAGGACGC GTTCATCAAG GCGTATCGCG CGTTGCCGCA GTTTCGCGGC
GAGTCGGCGT TCTACACGTG GTTGTACCGG ATTGCCGTCA ATACGGCGAA GAACTACCTT
GCGACCCAGG GGCGCCGGGC GCCCACGTCC ACCGACGCGG ACGCCGAAGA GGCTGAAACT
TTCTCCGACG CGGACCAACT AAGGGATATC AACACGCCTG AGTCGATGTT GATGAGCAAG
CAGATCGCCC AAACGGTCAA CGCCGCGATG GCGCTGTTGC CGGAAGAGTT GCGAACGGCC
ATCACGCTGC GCGAGATCGA AGGTCTGAGC TACGAAGAGA TCGCGGAGAT GATGGGTTGC
CCGATCGGCA CCGTCCGCTC GCGGATCTTT CGCGCCCGCG AGGCGATCGC GGCAAAATTG
CGGCCGCTGC TCGATACGCC GGAAGGCAGG CGCTGGTAA
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| Protein sequence | MTEPFHAASA GTQHVVLRAS ACLRVACALF VPAVGAALYA CAAPLVGGGG AAALAGLAAA
LVALRARAAC VRHQPAALLI DAGAGVLAAF DRDGRRLARG QIAGCTQWSD LLVVLRVQGR
GRRVTPLVIP ADAVDAAVFR ALCVLGRRAA RGALAAAWRP RGRPLPVENA HERLERERYN
SAPRCFPRLR ICQVSEKEID QVLVERVQNG DKAAFELLVS KYHRKIIRLI SRLVRDPAEV
EDVAQDAFIK AYRALPQFRG ESAFYTWLYR IAVNTAKNYL ATQGRRAPTS TDADAEEAET
FSDADQLRDI NTPESMLMSK QIAQTVNAAM ALLPEELRTA ITLREIEGLS YEEIAEMMGC
PIGTVRSRIF RAREAIAAKL RPLLDTPEGR RW
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