| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BURPS1106A_2666 |
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| Symbol | pdhB |
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| ID | 4899693 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia pseudomallei 1106a |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009076 |
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| Strand | - |
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| Start bp | 2626342 |
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| End bp | 2627988 |
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| Gene Length | 1647 bp |
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| Protein Length | 548 aa |
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| Translation table | 11 |
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| GC content | 70% |
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| IMG OID | 640135893 |
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| Product | dihydrolipoamide acetyltransferase |
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| Protein accession | YP_001066919 |
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| Protein GI | 126452707 |
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| COG category | [C] Energy production and conversion
[I] Lipid transport and metabolism |
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| COG ID | [COG0508] Pyruvate/2-oxoglutarate dehydrogenase complex, dihydrolipoamide acyltransferase (E2) component, and related enzymes
[COG4770] Acetyl/propionyl-CoA carboxylase, alpha subunit |
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| TIGRFAM ID | [TIGR01348] pyruvate dehydrogenase complex dihydrolipoamide acetyltransferase, long form |
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Plasmid Coverage information |
| Num covering plasmid clones | 7 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAGTCAAG CGATCGAAGT CAAGGTGCCG GATATCGGCG ATTACAAGGA CGTGCCCGTC
ATCGAAGTGC TCGTGAAGCC GGGCGATGCG GTCGAGCCCG AGCAGTCGCT CGTCACGCTC
GAATCGGACA AGGCGACGAT GGACGTGCCG AGCCCGTCGG CGGGCACGGT CAAGGAAGTG
AAGGTGAAGG TCGGCGACGC GGTGTCGCAA GGCTCGCTGA TCGTGCTGCT CGACGGCGCG
CAGGCGGCGG CCCAGCCCGC GCAGGCGAAC GGCGCCGCGA CGAGCGCCGC GCAGCCGGCG
GCGGCGCCCG CTGCCGCGCC TGCGCCGGCG GCGGCCGCGG GCGGCGGCAC GGTCGACGTG
AAGGTGCCGG ACATCGGCGA CTACAAGGAC GTGCCCGTCA TCGAGATCGC CGTGAAGATC
GGCGACACGG TCGAGAAGGA GCAGTCGCTC GTCACGCTCG AATCGGACAA GGCGACGATG
GACGTGCCGA GCCCGGCCGC GGGCGTCGTC AAGGACATCA AGGTGAAGGT CGGCGATGCG
GTGTCGGAAG GTTCGCTGAT CGTCGTGCTC GAAGCATCGG GCGGCGCCGC CGCGAGCGCG
CCGCAGGCGG CCGCGCCCGC CCCCGCGCCG GCGCCCGCGC CCGCGCCCGC GCCCGCGCCG
CAGGCCGCAC CCGCGGCTGC GCCGGCCCCC GCGCAGGCAC CGGCACCCGC CGCGAGCGGC
GAGTACCGCG CGAGCCACGC GTCGCCGTCG GTGCGCAAGT TCGCGCGCGA GCTCGGCGTC
GACGTGTCGC GCGTCACGGG CACGGGGCCG AAGAGCCGCA TCACGAAGGA CGACGTCACC
GCGTTCGTGA AGGGCGTGAT GACGGGACAG CGCGCGGCGC CCGGCGCCGC GGCCGCGCCC
GCGGGCGGCG GCGAGCTGAA CCTGCTGCCG TGGCCGAAGG TCGACTTCTC GAAGTTCGGC
CCGTTCGAGG CGAAGCCGCT GTCGCGCATC AAGAAGATCT CGGGCGCGAA CCTGCATCGC
AACTGGGTGA TGATCCCGCA CGTCACGAAC AACGACGAGG CGGACATCAC CGAGCTCGAA
GCGCTGCGCG TGCAACTGAA CAAGGAGCAC GAGAAGGCGG GCGTGAAGTT CACGATGCTC
GCGTTCGTGA TCAAGGCGGT CGTCGCCGCG CTGAAGAAGT TCCCGACCTT CAACGCGAGC
CTCGATGGCG ACAACCTCGT GTTCAAGCAG TACTACCACA TCGGTTTCGC CGCCGACACG
CCGAACGGCC TCGTCGTGCC GGTGATCCGC GACGCGGACA AGAAGGGGCT CGTCGACATC
GCGAAGGAAA TGGCCGAGCT GTCGAAGGCC GCGCGCGAAG GCAAGCTCAA GCCGGACCAG
ATGCAGGGCG GCTGCTTCTC GATCTCGTCG CTCGGCGGGA TCGGCGGCAC GCACTTCACG
CCGATCATCA ATGCGCCGGA AGTGGCGATC CTCGGGCTGT CGCGCGGCCA GATGAAGCCG
GTGTGGGACG GCAAGCAGTT TGTGCCGCGC CTCACGCTGC CGCTGTCGCT GTCGTATGAC
CATCGCGTGA TCGATGGCGC GGAAGCCGCG CGGTTCAATG CGTATCTCGG CGCGTTGCTT
GCCGATTTCC GTCGCATCAT TCTTTGA
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| Protein sequence | MSQAIEVKVP DIGDYKDVPV IEVLVKPGDA VEPEQSLVTL ESDKATMDVP SPSAGTVKEV
KVKVGDAVSQ GSLIVLLDGA QAAAQPAQAN GAATSAAQPA AAPAAAPAPA AAAGGGTVDV
KVPDIGDYKD VPVIEIAVKI GDTVEKEQSL VTLESDKATM DVPSPAAGVV KDIKVKVGDA
VSEGSLIVVL EASGGAAASA PQAAAPAPAP APAPAPAPAP QAAPAAAPAP AQAPAPAASG
EYRASHASPS VRKFARELGV DVSRVTGTGP KSRITKDDVT AFVKGVMTGQ RAAPGAAAAP
AGGGELNLLP WPKVDFSKFG PFEAKPLSRI KKISGANLHR NWVMIPHVTN NDEADITELE
ALRVQLNKEH EKAGVKFTML AFVIKAVVAA LKKFPTFNAS LDGDNLVFKQ YYHIGFAADT
PNGLVVPVIR DADKKGLVDI AKEMAELSKA AREGKLKPDQ MQGGCFSISS LGGIGGTHFT
PIINAPEVAI LGLSRGQMKP VWDGKQFVPR LTLPLSLSYD HRVIDGAEAA RFNAYLGALL
ADFRRIIL
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