Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | BURPS1106A_2619 |
Symbol | dapA |
ID | 4899583 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Burkholderia pseudomallei 1106a |
Kingdom | Bacteria |
Replicon accession | NC_009076 |
Strand | - |
Start bp | 2581172 |
End bp | 2582074 |
Gene Length | 903 bp |
Protein Length | 300 aa |
Translation table | 11 |
GC content | 66% |
IMG OID | 640135846 |
Product | dihydrodipicolinate synthase |
Protein accession | YP_001066872 |
Protein GI | 126453555 |
COG category | [E] Amino acid transport and metabolism [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG0329] Dihydrodipicolinate synthase/N-acetylneuraminate lyase |
TIGRFAM ID | [TIGR00674] dihydrodipicolinate synthase |
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Plasmid Coverage information |
Num covering plasmid clones | 12 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGCTAACG GCACTCAAGA CGGCATTCAA ATCCGCGGCA GCGTCCCCGC GATCGTCACC CCGATGCTCG AGGACGGCGG CCTCGATCTG GCGGCCTTCC GCAAGCTGAT CGACTGGCAT ATCGAAGAGG GGACGGATGC CCTCGTCGTG GTCGGCACGA GCGGCGAATC GGCGACGCTT TCCGTCGACG AGCACGTGCT CATGATCGAG ACCGCGGTCA AGCACGCGGC GAAGCGGATT CCGATCGTCG CGGGCGCGGG CGGCAACTCG ACGACCGAGG CGATCGAACT GTCGAAGCAT GCGAAGGCGG TGGGCGCCGA TGCGACGCTG CAAGTGGTGC CGTACTACAA CAAGCCGACG CAGGAAGGGA TCTACCGCCA CTTCAAGGCG ATCGCCGAGG CAGTGGACCT TCCGGTGATC CTGTACAACG TGCCGGGCCG CACTGTCGCG GACATGTCGA ACGAGACGAC CCTGCGGCTT GCGCAAGTGC CGGGCATCAT CGGCGTGAAG GACGCGACGG GCAATATCGA TCGCGCCGCG CAACTGATCA AGGCGGCGCC CGCGCACTTC TCGATCTACA GCGGCGACGA TCCGACCGCG ATCGCGCTGA TGCTCCTCGG CGGCCACGGC AACATCTCGG TGACGGCGAA CGTCGCGCCG CGCGCGATGA GCGAGCTTTG CCGCGCGGCG CTTGCCGCCG ACGTGAAGAC GGCGCGCGAG ATCCACATGA AGCTCCTGTC GCTGCACAAG CATCTGTTCA TCGAGGCGAA CCCGATTCCG GTGAAGTGGG CGCTGCAACA GATGGGCAAG ATCGCGGGCG GCATCCGCCT GCCGCTCACG CCGCTCGACG AGCGCTGCCA TGAAACCGTG CGCGGCGCGC TTCGCGAGGC CGGCCTCCTG TGA
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Protein sequence | MANGTQDGIQ IRGSVPAIVT PMLEDGGLDL AAFRKLIDWH IEEGTDALVV VGTSGESATL SVDEHVLMIE TAVKHAAKRI PIVAGAGGNS TTEAIELSKH AKAVGADATL QVVPYYNKPT QEGIYRHFKA IAEAVDLPVI LYNVPGRTVA DMSNETTLRL AQVPGIIGVK DATGNIDRAA QLIKAAPAHF SIYSGDDPTA IALMLLGGHG NISVTANVAP RAMSELCRAA LAADVKTARE IHMKLLSLHK HLFIEANPIP VKWALQQMGK IAGGIRLPLT PLDERCHETV RGALREAGLL
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