| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BURPS1106A_2583 |
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| Symbol | |
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| ID | 4899344 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia pseudomallei 1106a |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009076 |
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| Strand | + |
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| Start bp | 2546484 |
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| End bp | 2547719 |
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| Gene Length | 1236 bp |
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| Protein Length | 411 aa |
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| Translation table | 11 |
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| GC content | 71% |
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| IMG OID | 640135810 |
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| Product | RND family efflux transporter MFP subunit |
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| Protein accession | YP_001066837 |
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| Protein GI | 126451497 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG0845] Membrane-fusion protein |
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| TIGRFAM ID | [TIGR01730] RND family efflux transporter, MFP subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 2 |
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| Plasmid unclonability p-value | 0.0404665 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCCTTTCG TCACGCGCCG TAAGCTCGTC GCGTTCGCAC TGCTGTCGCT CGGCGCGATC
ACGCTCGCCG CGTGGCTCGT CAAACCCTCG GCCGACGCGC GCGCGGCGGC CGCGAAACAG
GCCGACGCGG CGATCCCCGT CACGGCGGCC ATCGTCGGCA CGATAAACCT GCCCGTCTAT
CTAACCGGCG TCGGCGCCGT CACGCCGCAG TACGACGTGA CCGTGAGAAG CCAGGTCGAC
GGCCAGATCA CCCATGTGCG GTTCCACGAA GGCCAGCAGG TGCGCGCGGG CGACGTGCTC
GTCGAGATCG ATCGCCGCGC GCTCCAGGCG ACCGCCGACC AGGCGACAGC GAAGCTCGAG
CAGGACAAGG CGACGCTCGC CAACGCCCGG CTCGAGCTCG CGCGCCATCA GCGGCTCGCC
GAAATGAACG CGGCGCCGGT GCAGATGCTG GATACATGGA AAGCGCGCGT CAACGAGCTG
CATGCGCAGA TCCGCGGCGA TCAGGCCGCC GTGCAGAACG CCCGCGTGGC CGTCGATTAC
ACGACGATCC GCGCGCCCAT CTCGGGGCGC ATCGGCTTTC GGCTCGTCGA CCAGGGCAAC
CTCGTGAAGG CCAACGATAC GGCGCTGCTC ACGCTCGTCA CGACTTCGCC GATCACCGCG
ATCTATTCCG AATCGCAGGA TGCACTGCCG GCGATCCAGG CGGCGCTGCG GCGCGGCGAG
GTCGAGGCCG TCGCGATGAG CACGGACGGC GAGACGACGC TCTCGCATGG GCGCCTGCGC
ACGATCGAGA ACCGCGTCGA TCCGACCAGC GGCGTGGTCC GGATGAAAGC GGTGTTCGAG
AATGCCGACG GCGCGCTGTG GCCCGGGCAG TCGGTGATGA TCCGCACCGT CGTCGACGTG
CTGCGCAACG CGACGGCGGT GCCGGAGGAC GCGATCCAGA TCGGGCCGGA CGGCAGCTTC
GTCTATGTGA TCGGCGCCGG CGACAAGGTC GCGATGCGGC CCGTCGAGGT GTCGCATCGG
GTGCTCGGCT ACGCGGCCGT CAAGCACGGC CTGCAAGCCG GCGAGCGCGT CGTCGTGCAG
GGCCAGTACC GGTTGCAGGA CGGCGCGCGC GTCGCCGCGA CGATGATGCC GGCGCACGAC
GCACCCGACG CCGCCGCCGG CGCGCGGAAC GCTCGCGCGC CGGCGGCGGG CCGCGAAGCG
CCCGCCGTGC CCGCGACGAA CGCGCGCCGA TCATGA
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| Protein sequence | MPFVTRRKLV AFALLSLGAI TLAAWLVKPS ADARAAAAKQ ADAAIPVTAA IVGTINLPVY
LTGVGAVTPQ YDVTVRSQVD GQITHVRFHE GQQVRAGDVL VEIDRRALQA TADQATAKLE
QDKATLANAR LELARHQRLA EMNAAPVQML DTWKARVNEL HAQIRGDQAA VQNARVAVDY
TTIRAPISGR IGFRLVDQGN LVKANDTALL TLVTTSPITA IYSESQDALP AIQAALRRGE
VEAVAMSTDG ETTLSHGRLR TIENRVDPTS GVVRMKAVFE NADGALWPGQ SVMIRTVVDV
LRNATAVPED AIQIGPDGSF VYVIGAGDKV AMRPVEVSHR VLGYAAVKHG LQAGERVVVQ
GQYRLQDGAR VAATMMPAHD APDAAAGARN ARAPAAGREA PAVPATNARR S
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