| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BURPS1106A_2547 |
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| Symbol | |
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| ID | 4900276 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia pseudomallei 1106a |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009076 |
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| Strand | - |
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| Start bp | 2501035 |
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| End bp | 2502987 |
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| Gene Length | 1953 bp |
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| Protein Length | 650 aa |
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| Translation table | 11 |
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| GC content | 71% |
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| IMG OID | 640135774 |
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| Product | ABC transporter, periplasmic substrate-binding protein |
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| Protein accession | YP_001066801 |
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| Protein GI | 126453009 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG4166] ABC-type oligopeptide transport system, periplasmic component |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 3 |
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| Plasmid unclonability p-value | 0.524722 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGACGATCG GTTCGCCCCG GGCCCGCCGG CCGCGATCGC CGCAACGCGC GGCGCCATCA
GAACAGGCCG CGCGCGCCGC CGCGCCGCGA CGGGCGGCCC GCGCGCGCGC CGCGCTCGCG
CGCTTCGCGC GCCGGGCGGC GGCGGGCGTC GCGCTCGCCT TCGTCGCGGC GCCCGCGGCG
CACGCCGTCT ACGCGATCGC GCAGTACGGC GAGCCGAAGT ATCCGGCGGG CTTCGCGCAT
TTCGACTACG TGAACCCCGA CGCGCCGAAG GGCGGCACGC TCGTGCTCGC GAACCCGAAC
CGGCTCACGA CGTTCGACAA GTTCAATCCG TTCACGATGC GCGGCAACCC GGCGCCCGGA
ATCGACCTGC TGTTCGAGAG CCTGACGACG GGCAGCGCCG ACGAGCCCGC CTCCGCGTAC
GGCCTGCTCG CGGACGACAT CGCCGTCGCG CCGGACGGCC TGTCGGTCAC GTTCCATCTG
AATCCGCGCG CGCGCTTCTC GAACGGAGAA CCCGTCACCG CGGCGGACGT CAAGTATTCG
TTCGACACGC TGAAGAGCCC GAAGGCGGCG CCGCAATACC CGGCGTACTA CGCGGACATC
GCGCGCGCGG TGATCGTCGA CGCGGCGACC GTGCGCTTCG AGTTTCGCCG CAAGAACCGC
GAGCTGCCGC TGATCGCGGG CGGCATCCCG GTGTTCTCGC GCAAATGGGG CGTGCGCGCG
GACGGCTCGC GCATCGCGTT CGACCAGATC GCGTTCGAGC AGCCGATCGG CAGCGGCCCG
TACCTGATCG AGCGCTACGA CAGCGGGCGC ACGATCACGT ACCGGCGCAA TCCCGCCTAC
TGGGGCGCGG CGCTGCCCGT GCGGATCGGC ACGAACAACT TCGAGCGCAT CGTCTACAAG
CTGTACGGCG ACGGCGTCGC GCGGCTCGAG GCGTTCAAGG CCGGCGAATA CGACGTGCTC
GTCGAGTACA TCGCGCGCAA CTGGGCGCGG CGCGACGTCG GCAAGCGCTT CGACAGCGGC
GAGCTCGTCA AGCGCGAGTT CCGCCAGCAC AACGGCGCGG GAATGCAGGG CTTCTTCATG
AACCTGCGCC GGCCGCTGTT CCAGGACGTG CGCGTGCGCC ACGCGCTCGA TCTCGCGTTC
GATTTCGAAT GGCTGAACCG GCAGCTTTTC TATGGCGCGT ACACGCGCCT GAACAGCTAT
TTCGCCGATA CCGACCTGCA GGCGACGGGC ACGCCGAGCG CGGGCGAGCT CGCGCTGCTC
GCCCCGTTGC GCGCGCAGCT CGACCCGGCC GTGTTCGGGC CGATGACCGT GCAGCCGAGC
ACCGATTTGC CCGCGTCGCT GCGCGCGAAC CTGCTGAAGG CGCGCGCGCT GCTCGCCGAG
GCCGGCTGGA CCTACCGCGA CGGCGCGCTG CGCAACGCGA AGGGCGAGCC GTTCGTGTTC
GAGATTCTCG ACGATTCGGG CTCGGCGTTC GAGCCGGTGG TCGCCGCGTA CATCCGCAAT
CTCGCGAAGC TCGGGATCGT CGCGAAGTAC CGGACGGCCG ATTTCGCGCT GCTGCAAAAG
CGCCTCGACG CGTTCGACTA CGACATGACG ACGGTCCGCT ACCCGGGCGT CCAGGTGCCG
GGCGCCGAGC AGGTCGCACG CTTCGCGAGC CGCTATGCGG ACGAGCCGGG CTCGGACAAC
CTGACGGGGC TCAAGTCGCC CGCGGTCGAC GCGATCCTGA AGGCGCTCAC GCAGGCCGAG
ACGCGCGACG AACTGCTCGA CGCGACGCAC GCGCTCGACC GCGTGCTGAT GCACGGCTAC
TATGCGGTGC CGCAGTGGTA CAGCGCCGTG CACCGGATCG CGTTCAAGCG CACGCTCGCC
TACCCGTCGG TGCTGCCGCT GTACTATTCG GCGGAAGGCT GGGTCGCCTC GACGTGGTGG
GCGAGGCCCG AGCATGGCGC GTCCGCGCGT TAG
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| Protein sequence | MTIGSPRARR PRSPQRAAPS EQAARAAAPR RAARARAALA RFARRAAAGV ALAFVAAPAA
HAVYAIAQYG EPKYPAGFAH FDYVNPDAPK GGTLVLANPN RLTTFDKFNP FTMRGNPAPG
IDLLFESLTT GSADEPASAY GLLADDIAVA PDGLSVTFHL NPRARFSNGE PVTAADVKYS
FDTLKSPKAA PQYPAYYADI ARAVIVDAAT VRFEFRRKNR ELPLIAGGIP VFSRKWGVRA
DGSRIAFDQI AFEQPIGSGP YLIERYDSGR TITYRRNPAY WGAALPVRIG TNNFERIVYK
LYGDGVARLE AFKAGEYDVL VEYIARNWAR RDVGKRFDSG ELVKREFRQH NGAGMQGFFM
NLRRPLFQDV RVRHALDLAF DFEWLNRQLF YGAYTRLNSY FADTDLQATG TPSAGELALL
APLRAQLDPA VFGPMTVQPS TDLPASLRAN LLKARALLAE AGWTYRDGAL RNAKGEPFVF
EILDDSGSAF EPVVAAYIRN LAKLGIVAKY RTADFALLQK RLDAFDYDMT TVRYPGVQVP
GAEQVARFAS RYADEPGSDN LTGLKSPAVD AILKALTQAE TRDELLDATH ALDRVLMHGY
YAVPQWYSAV HRIAFKRTLA YPSVLPLYYS AEGWVASTWW ARPEHGASAR
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