| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BURPS1106A_2523 |
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| Symbol | |
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| ID | 4900940 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia pseudomallei 1106a |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009076 |
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| Strand | + |
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| Start bp | 2480689 |
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| End bp | 2482230 |
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| Gene Length | 1542 bp |
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| Protein Length | 513 aa |
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| Translation table | 11 |
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| GC content | 72% |
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| IMG OID | 640135750 |
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| Product | DEAD/DEAH box helicase |
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| Protein accession | YP_001066782 |
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| Protein GI | 126453899 |
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| COG category | [J] Translation, ribosomal structure and biogenesis
[K] Transcription
[L] Replication, recombination and repair |
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| COG ID | [COG0513] Superfamily II DNA and RNA helicases |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 3 |
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| Plasmid unclonability p-value | 0.239801 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGACTTCGA GCCATTCCCT CAGCCCGCTC AACGCGATCG CCGACGAGGC GCTCGGCCTG
CCCGCCGCCG CCGCTCAACC GGCCGCGAGC GACGCCTGCG ACGCCGCGTC GGACGAACCG
ACGTTCGCGT CGCTCGGCCT GTCGCCGGAG ATCGTCTCCG CGCTGCAGGC GGCCGGCTAC
GTGAAGCCGA CGCCCGTGCA GCAGCGCGCG ATTCCGGCCG GCATCGCCGG CCGCGACCTG
CTCGTGTCGA GCCCGACGGG CTCCGGCAAG ACGGCCGCGT TCATGCTGCC CGCGATCGAG
CGCTTCGCGC AGTTGCAAAA GGCGCAGGCG CAGCAGCCGC GCGCGCCGCG CGAAGGGCAG
CCGGGCGAGC GCCGCGGCCG CCGCCCGCAA CCCGTCGCGC GCCCCGGCCT GCTCGTCCTC
ACGCCGACGC GCGAGCTCGC GATGCAGGTG ACGACGGCCG CGTCGACGTA CGGCAAGCAC
CTGCGCCGCC TGCGCACGGT CAGCATCCTC GGCGGCGTCG CGTACGGCCA GCAGTTGATG
CTGCTCGCGA AGAACCCGGA GATCCTCGTC GCGACGCCGG GGCGCCTGCT CGACCACCTC
GAGCGCGGCC GCATCGATTT GTCCGAACTG AAGATGCTCG TGCTCGACGA AGCCGACCGC
ATGCTCGACA TGGGTTTCAT CGACGACATC GACACGATCG TCGCGGCGAC GCCCGCGACA
CGCCAGACGA TGCTGTTCTC GGCGACGCTC GACGGCAAGA TCGGCTCGCT CACGAACCGT
CTGCTGAAGG ATCCGGAGCG CATCGAGATC ACGCAGAAGA TCGAATCGCG CTCGAACATT
GCGCAAACCG TGCACTACGT CGACGACCGC GATCACAAGG ATCGCCTGCT CGATCACCTG
CTGCGCGATG TCGCGCTCGA TCAGGCGATC ATCTTCACCG CGACCAAGAT CGACGCCGAC
CAGCTCGCCG GCCGCCTCGC CGACGCCGGC TTCCAGTCGG CCGCGCTGCA CGGCGACCTG
CCGCAGGGCG CGCGCAACCG CACGATCCGC GCGCTGCGCG AGCGCCGCGT GCGCGTGCTC
GTCGCAACCG ACGTCGCCGC GCGCGGGATC GACATCCCCG GCATCACGCA CGTGTTCAAC
TACGACCTGC CGAAGTTCGC CGAGGACTAC GTGCACCGGA TCGGCCGCAC CGGCCGCGCG
GGCCGCTCCG GCACCGCGGT GAGCCTCGTG CATCACGCGG AGCAAGGCGC GCTCAAGCGC
ATCGAGCGCT TCGTGCGCGC GCCGCTGCCG GTGAATGTCG TCGAAGGCTT CGAGCCGCGC
AAGGCGCCGC CGCCGCGTAA CGATCGCGGC AACGGCCGCG GCCGTCCGGG CGGCAACGGC
AATGGCGGCC GCCGGTTCGG CGGCAAGCCG GGCGGCGGCC ATGGCGGCGG CCGCTCCGGC
GGCTGGAGCG GCAAGCCGGG TGGCGGCAAC CGTGAAGCCT ACGGCGCGCG GCGCGGCGAC
GGCCAGCGCA ACGGCCCGCG CCGCGGCAAT TCCGCGGCAT AA
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| Protein sequence | MTSSHSLSPL NAIADEALGL PAAAAQPAAS DACDAASDEP TFASLGLSPE IVSALQAAGY
VKPTPVQQRA IPAGIAGRDL LVSSPTGSGK TAAFMLPAIE RFAQLQKAQA QQPRAPREGQ
PGERRGRRPQ PVARPGLLVL TPTRELAMQV TTAASTYGKH LRRLRTVSIL GGVAYGQQLM
LLAKNPEILV ATPGRLLDHL ERGRIDLSEL KMLVLDEADR MLDMGFIDDI DTIVAATPAT
RQTMLFSATL DGKIGSLTNR LLKDPERIEI TQKIESRSNI AQTVHYVDDR DHKDRLLDHL
LRDVALDQAI IFTATKIDAD QLAGRLADAG FQSAALHGDL PQGARNRTIR ALRERRVRVL
VATDVAARGI DIPGITHVFN YDLPKFAEDY VHRIGRTGRA GRSGTAVSLV HHAEQGALKR
IERFVRAPLP VNVVEGFEPR KAPPPRNDRG NGRGRPGGNG NGGRRFGGKP GGGHGGGRSG
GWSGKPGGGN REAYGARRGD GQRNGPRRGN SAA
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