| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BURPS1106A_2504 |
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| Symbol | |
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| ID | 4901792 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia pseudomallei 1106a |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009076 |
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| Strand | + |
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| Start bp | 2461387 |
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| End bp | 2462619 |
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| Gene Length | 1233 bp |
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| Protein Length | 410 aa |
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| Translation table | 11 |
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| GC content | 70% |
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| IMG OID | 640135731 |
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| Product | succinyldiaminopimelate transaminase |
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| Protein accession | YP_001066763 |
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| Protein GI | 126454437 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0436] Aspartate/tyrosine/aromatic aminotransferase |
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| TIGRFAM ID | [TIGR03538] succinyldiaminopimelate transaminase |
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Plasmid Coverage information |
| Num covering plasmid clones | 4 |
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| Plasmid unclonability p-value | 0.181196 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | GTGAATCCTC GCCTCGACAC GCTCCAGCCC TATCCGTTCG AAAAGCTCCG CGCGCTCTTT
GCCGGCGTGA CGCCAAGCAC GCCCCTGCCG CCGATCAGCT TCGGCATCGG CGAGCCGAAG
CACGCGACGC CCGCGCTGAT CCGCGACGCC GCGGCCGCCG CGCTCGACGG CCTCGCGTCG
TATCCGGCGA CGGCGGGCAC CGACGCGCTT CGCGATACCG TCGCGCGCTG GCTCGAGCGG
CGCTACGGGC TGCCCGCGAT CGACGCGACG ACGCAGGTGC TCGCCGCGTC GGGCTCGCGC
GAGGCGCTCT TCTCGCTCGC GCAGGCGGTG ATCGATTCGA GCCCGCGCGA AAACGGCGCG
ACGCAGGACG GCGAAAGGCC GATCGTACTC TGTCCGAATC CTTTCTATCA AATCTACGAA
GGCGCGGCGC TCCTCGCGGG CGCCGCGCCG TACTTCGTCA ACAGCGATCC GGCGCGCAAC
TTCGCGCCCG ACTATTCGAG CGTGCCGGCC GACGTCTGGG CGCGCACGCA GCTCGTCTAC
GTGTGCTCGC CGGGCAACCC GACGGGCGCC GTGCTCACGC TCGACGACTG GCGCGAGCTG
TTCGCGCTGT CCGACGAACA CGGCTTCGTG ATCGCGTCGG ACGAATGCTA TTCGGAGATC
TATTTCGACG AGACGAAGCC GCCGCTGGGC GGCCTCGAGG CGGCGCACCG GCTCGGCCGC
GACTTCACGC GCCTCGTGAT GCTCTCGAGC CTGTCCAAGC GTTCGAACGT GCCGGGCATG
CGTTCGGGCT TCGTCGCGGG CGACGCGGCG CTCCTCAAGC GCTTCCTGCT GTACCGCACC
TACCACGGCG CGGCGCTGTC GCCCGTCTGG CAGAAGGCGA GCGTCGCCGC CTGGGGCGAC
GAGGCGCACG TGCGCGAGAA CCGCGCGCTC TACGCGCAGA AATTCGCGAC CGTCACGCCG
ATGCTCGCCG AGGTCCTCGA CGTGCGTCTG CCCGATGCCG CGTTCTACCT GTGGGCGAAC
GTCGCGCGAA CCGGCCTGTC GGATACCGAG TTCGCCCGGC GCCTCTACGC CGACTATAAT
GTGACGGTCC TGCCCGGCTC GTATCTCGCC CGCGACGCGC ACGGCGCGAA TCCCGGCCGC
GACTTCGTCC GGATCGCGCT CGTCGCCGGC ACGGCCGAAT GCGTCGAAGG CGCGCAGCGC
ATCGTCGATT TCTGCCGCGG CCTCGCCCGC TGA
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| Protein sequence | MNPRLDTLQP YPFEKLRALF AGVTPSTPLP PISFGIGEPK HATPALIRDA AAAALDGLAS
YPATAGTDAL RDTVARWLER RYGLPAIDAT TQVLAASGSR EALFSLAQAV IDSSPRENGA
TQDGERPIVL CPNPFYQIYE GAALLAGAAP YFVNSDPARN FAPDYSSVPA DVWARTQLVY
VCSPGNPTGA VLTLDDWREL FALSDEHGFV IASDECYSEI YFDETKPPLG GLEAAHRLGR
DFTRLVMLSS LSKRSNVPGM RSGFVAGDAA LLKRFLLYRT YHGAALSPVW QKASVAAWGD
EAHVRENRAL YAQKFATVTP MLAEVLDVRL PDAAFYLWAN VARTGLSDTE FARRLYADYN
VTVLPGSYLA RDAHGANPGR DFVRIALVAG TAECVEGAQR IVDFCRGLAR
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