Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | BURPS1106A_2502 |
Symbol | smc |
ID | 4899720 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Burkholderia pseudomallei 1106a |
Kingdom | Bacteria |
Replicon accession | NC_009076 |
Strand | - |
Start bp | 2456514 |
End bp | 2460026 |
Gene Length | 3513 bp |
Protein Length | 1170 aa |
Translation table | 11 |
GC content | 70% |
IMG OID | 640135729 |
Product | chromosome segregation protein SMC |
Protein accession | YP_001066761 |
Protein GI | 126451882 |
COG category | [D] Cell cycle control, cell division, chromosome partitioning |
COG ID | [COG1196] Chromosome segregation ATPases |
TIGRFAM ID | [TIGR02168] chromosome segregation protein SMC, common bacterial type |
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Plasmid Coverage information |
Num covering plasmid clones | 0 |
Plasmid unclonability p-value | 0.240456 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | GTGCGTCTGA GCTCGATCAA ACTCGCTGGC TTCAAATCTT TCGTCGATCC CACGCACTTC CAGGTTCCAG GTCAACTGGT CGGCGTGGTG GGCCCGAACG GGTGCGGCAA GTCCAACATC ATCGACGCCG TGCGCTGGGT GCTCGGCGAG TCGCGCGCCT CCGAGCTGCG CGGCGAGTCG ATGCAGGACG TGATCTTCAA CGGCTCGACG ACGCGCAAGC CCGGCAGCCG GGCGAGCGTC GAGCTGATCT TCGACAACTC CGACGGCCGC GCGGCCGGCC AGTGGGGCCA GTACGGCGAG ATCGCCGTGA AGCGCGTGCT CACGCGCGAC GGCACGTCGA GCTATTACAT CAACAATCTG CCCGCGCGGC GCCGCGACAT CCAGGACATC TTCCTCGGCA CGGGCCTCGG CCCGCGTGCG TACGCGATCA TCGGGCAGGG GATGATCGCG CGGATCATCG AGGCGAAGCC CGAAGAGCTG CGCGTGTTCC TCGAAGAGGC GGCGGGCGTG TCGAAGTACA AGGAGCGCCG CCGCGAGACC GAGAACCGGC TGCACGACAC GCGCGAGAAT CTGACGCGCG TCGAGGACAT CGTCCGCGAG CTCGGCGCGA ATCTCGAGAA GCTCGAGGCG CAGGCGGTGG TCGCGACGAA GTACAAAGAG CTCGTCGCCG ACGGCGAGGA GAAGCAGCGC CTGCTGTGGC TGCTGCGCAA GAACGAGGCG GCCGCCGAGC AGGACAGGCA GCGCCGTGCG ATCGGCGACG CGCAGATCGA GCTCGACGCG CAGACCGCGA AGCTGCGCGA AGTCGAGGCG CAGCTCGAGA CGCTGCGCGT CGCGCACTAT TCGGCGAGCG ACGCGATGCA GGGCGCGCAG GGCGCGCTCT ACGAGGCGAA CGCCGAGGTG AGCCGGCTCG AGGCGCAGAT CAAGTTCATC GTCGAGTCGC GCAACCGCGT GCAGGCGCAG ATCGCCGCGC TCGTCGCGCA GCAGGAGCAG TGGCGCGCGC AGGCGGACAA GGCGCAGGGC GATCTCGAAG CGGCCGAAGA GGCGCGCGCG GTCGCCGACG AAAAGGCGGC GATCGCCGAG GACGACGCGG CCGCGAAGCA CGACGCGCTG CCCGCGCTCG AGGCGCGCTG GCGCGATGCG CAGACGGGCC TGAACGACGA GCGCGGCCGG ATCGCGCAGA CCGAACAGGC GCTGAAGCTC GAAGCCGCGC ACCAGCGCAA CGCCGATCAG CAATTGCAGC AGTTGCAGCA GCGCCACGAG CGCCTGAAGG TCGAGGCGGG CGGCCTCGAC GCGCCGGACG AGGCGCAGCT CGAGGAACTG CGGATGCAGC TCGCCGAGCA CGAGGCGATG CTGGCCGAGG CGCAGGCGCG CCTCGCCGAC GCGCAGGAAG CGCTGCCGCG CCTCGACGCG CAGCGCCGCG CGGCGCACGA GCGCGTGCAG GCCGAGAGCG CGCAGATCCA TCAGCTCGAA GCGCGTCTCG CCGCGCTCAA GCAATTGCAG GAAAACGTGC AGACGCAGGG CAAGATCCAG CCGTGGCTCG ACAAGCACGA GCTCGGCGCG CTGCCGCGTC TGTGGAAGAA GCTGCACGTC GAGGCCGGCT GGGAAACCGC GCTCGAAGCG GTGCTGCGCG AGCGGCTCGC CGCGCTCGAA GTGTCGAATC TCGACTGGGT GAAGGCGTTC GCCACCGACG CGCCGCCCGC GAAGCTCGCG TTCTACGCGC CGCCCGCCGC GGGCGAGCCG CTCGCCGCGC CGGGCGCGTT GCGCCCGCTC CTGCCGCTCG TGCGCATCGA CGACGCGGGC TTGCGCGCGG TGCTCAACGA TTGGCTCGGC ACGGTGTTCG TCGCCGACGA CCTCGCGCAG GCGCTCGCCG CGCGCATGCA ATTGCCGCAG GGCGGCGCGT TCGTCGTGAA GGCGGGCCAC GTCGTCACGC GCTCGGGCGT GCAGCTCTAT GCGGCCGACT CCGAGCAGGC GGGCATGCTC GCGCGCGCGC AGGAAATCGA GAACCTGACG CGCCAGGTGC GCGCGCAGGC GCTCCTGTCC GACGAGGCGA AGGCGGCGGC GATCCGCGCG GAAGCCGCGC ACACGCAGGC GTCGCAGGCG CTGACCGAAG TGCGCGCGCA GGCCGAGCGT GCGACGCAGC GCGTGCACGC GCTGCAGATG GACGTGCTCA AGCTCACGCA GGCGCACGAG CGCTATACGC AGCGCAGCAC GCAGATCCGC GAGGAACTCG AGGAGATCGG CGCGCAGATC GAGGAGCAGC GTGCGCTGCG CGCGGAGTCG GAGGCGAATT TCGAGCGCCA CGACGCCGAG CTCGCCGAAT TGCAGGCGCG CTTCGAGGAC AATCAGCTCG CGTTCGAATC GCTCGACGAG ACGCTGACGA ACGCGCGCCA GGAGGCGCGC GAGCGCGAGC GCGCGGCCAC CGACGCGCGC TTCGCCGCGC GCCAGTCCGC GAACCGCATC GACGAGCTGA AGCGCTCGAT CCAGGTCGCG CACGAGCAGG CCGAGCGCGT CGCGGCGTCG CTCGAGGATG CGCGCGCGGA GCTCGAGACG ATCAACGAGC AGACCGCGCA CACCGGCCTG CAGGACGCGC TCGAAGTGCG CGCGGCGAAG GAGCAGGCGC TCGGCGCCGC GCGCGCGGAG CTCGACGATC TCACGGCGAA GCTGCGCGCG GCCGACGAGG CGCGGCTCGC CGCCGAGCGC TCGCTGCAGC CGCTGCGCGA TCGCATCACC GAGCTGCAAC TGAAGGAGCA GGCGGCGCGT ATGACGGGCG AGCAGTTCGC CGAGCAGCTC GCGACGGCCG AGGTCGACGA GGCCGCGCTG AAGGAAAAGC TCATGCCGGA CATGAAGCCG TCGTACCTGC AGGGCGAGGT CACGCGGATC AACAACGCGA TCAACGCGCT CGGCCCGGTC AACATGGCGG CGCTCGACGA GCTCGCGGCC GCGAGCGAGC GCAAGGTGTT CCTCGATGCG CAATCGGCCG ATCTGACGAA CGCGATCGAG ACGCTCGAGG ACGCGATCCG CAAGATCGAC CAGGAAACGC GCGCGCTCCT GCAGGCGACC TTCGACGAAG TGAACCGCCA TTTCAGCGAT CTGTTCCCGC GCCTGTTCGG CGGCGGGCAG GCGAAGCTCA TCATGACGGG CGACGAGATT CTCGACGCCG GCGTGCAGGT GATGGCGCAG CCGCCCGGCA AGAAGAACGC GACGATTCAC CTGCTGTCGG GCGGCGAGAA GGCGCTGACG GCGACCGCGC TCGTGTTCGC GATGTTCCAG CTGAATCCGG CGCCGTTCTG CCTGCTCGAC GAGGTCGACG CGCCGCTCGA CGACGCGAAC ACCGAGCGCT TCGCGAATCT CGTGCGCGCG ATGTCCGACA AGACGCAGTT CCTTTTCATC TCGCACAACA AGATCGCGAT GGAGATGGCG CAGCAACTGA TCGGCGTGAC GATGCAGGAG CAGGGCGTAT CGCGGATCGT CGCGGTCGAC ATGGAAACGG CCGCGGGTTT TGCCCAGAAT TGA
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Protein sequence | MRLSSIKLAG FKSFVDPTHF QVPGQLVGVV GPNGCGKSNI IDAVRWVLGE SRASELRGES MQDVIFNGST TRKPGSRASV ELIFDNSDGR AAGQWGQYGE IAVKRVLTRD GTSSYYINNL PARRRDIQDI FLGTGLGPRA YAIIGQGMIA RIIEAKPEEL RVFLEEAAGV SKYKERRRET ENRLHDTREN LTRVEDIVRE LGANLEKLEA QAVVATKYKE LVADGEEKQR LLWLLRKNEA AAEQDRQRRA IGDAQIELDA QTAKLREVEA QLETLRVAHY SASDAMQGAQ GALYEANAEV SRLEAQIKFI VESRNRVQAQ IAALVAQQEQ WRAQADKAQG DLEAAEEARA VADEKAAIAE DDAAAKHDAL PALEARWRDA QTGLNDERGR IAQTEQALKL EAAHQRNADQ QLQQLQQRHE RLKVEAGGLD APDEAQLEEL RMQLAEHEAM LAEAQARLAD AQEALPRLDA QRRAAHERVQ AESAQIHQLE ARLAALKQLQ ENVQTQGKIQ PWLDKHELGA LPRLWKKLHV EAGWETALEA VLRERLAALE VSNLDWVKAF ATDAPPAKLA FYAPPAAGEP LAAPGALRPL LPLVRIDDAG LRAVLNDWLG TVFVADDLAQ ALAARMQLPQ GGAFVVKAGH VVTRSGVQLY AADSEQAGML ARAQEIENLT RQVRAQALLS DEAKAAAIRA EAAHTQASQA LTEVRAQAER ATQRVHALQM DVLKLTQAHE RYTQRSTQIR EELEEIGAQI EEQRALRAES EANFERHDAE LAELQARFED NQLAFESLDE TLTNARQEAR ERERAATDAR FAARQSANRI DELKRSIQVA HEQAERVAAS LEDARAELET INEQTAHTGL QDALEVRAAK EQALGAARAE LDDLTAKLRA ADEARLAAER SLQPLRDRIT ELQLKEQAAR MTGEQFAEQL ATAEVDEAAL KEKLMPDMKP SYLQGEVTRI NNAINALGPV NMAALDELAA ASERKVFLDA QSADLTNAIE TLEDAIRKID QETRALLQAT FDEVNRHFSD LFPRLFGGGQ AKLIMTGDEI LDAGVQVMAQ PPGKKNATIH LLSGGEKALT ATALVFAMFQ LNPAPFCLLD EVDAPLDDAN TERFANLVRA MSDKTQFLFI SHNKIAMEMA QQLIGVTMQE QGVSRIVAVD METAAGFAQN
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