| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BURPS1106A_2497 |
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| Symbol | |
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| ID | 4902696 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia pseudomallei 1106a |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009076 |
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| Strand | + |
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| Start bp | 2450209 |
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| End bp | 2451924 |
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| Gene Length | 1716 bp |
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| Protein Length | 571 aa |
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| Translation table | 11 |
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| GC content | 75% |
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| IMG OID | 640135724 |
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| Product | RNA pseudouridine synthase family protein |
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| Protein accession | YP_001066756 |
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| Protein GI | 126451482 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG1187] 16S rRNA uridine-516 pseudouridylate synthase and related pseudouridylate synthases |
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| TIGRFAM ID | [TIGR00093] pseudouridine synthase |
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Plasmid Coverage information |
| Num covering plasmid clones | 2 |
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| Plasmid unclonability p-value | 0.142989 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCGCACAA AATTGACCGT CAAGAATCCG CGCCCGGCGA CGCCCGGCCG CGCCCCCGTC
CGCTCCGGCA GCCTCACCGC GCGCAAGGTC GCGCGGCCCG ACCCGAAAGC GGCGGGCGCG
AAACCCGCCG CGGCGAAGCC TGCTGCGAAG TCCGCATCGG CTGCCAAGCC GGCGGCGCCG
CGCGGCGCGG CGAACGCTGC GCCGAAGCGC GCGCCGGGGC CGTCGCACCC GGCCGCGGCA
TCCGAAGGCA AGCGCGTCGC GAAGCCGCGC GCCGCGCACG ACGCCGGCCG CACGGGCGGC
GAGCGTGCGC CGGCCAAGCG CGCCACCGCG CCCGGTGCGC CCGGCGCGGC GTCCGCGCCG
CGCACGCGCC GCACCGACGC GAAGCCGGCG CGCCGCACCG ACGAACGCCC TGCCGGCCGC
GCCGGCAATC GCCCTGCCGG CCGCGACGAG CGCGCACCGC GCGACTCGGA TGCGCGCGCG
TTCGATGCGG GCACGCGCGG TAAGGACCGC GCGCCCCGCG AGGGCGCAAG GCCCGGCGCA
CGGGGCGCGA CGGGCGCGAA GTTCGGCGGC GCGGCGCGCC GATCGGACGA CGCCGACCGT
CGAACGCCCC GCGCGACGCG TGCGGACAGC CGCGCGCGCG ATGCCGCGCC GTCGTCGTTC
GCGGGCAAGA CCACGACAGC CGGCAAGCGT GCGCCGCAGC GCGCCGACGA TCGCTACGGC
GCAGCCGGGA AGCGCACATC GCCGCGCCCC GAGCGAACCG AGCGTACCGC CCGCTTCGGC
GAACGGCCGG CCACCCGCGC GAGCGCATCC GGCGAGCGCC GCCCCACGGC CCGCGCGGCG
ACGGGTTCGC GCCTCAAGCT CGCGCAGCCG ATCAAGCGCG GCAGCGGCGA ACTGGGCGAA
TCCGCTCGCG GCGGTGAGCA CGGCGAACGC GGCAAGCGTA TCGAGCGCGG CGACGAAACC
GGCCTCGTGC GCCTGTCGAA GCGCATGTCG GAGCTGGGTC TCTGCTCGCG CCGCGAAGCA
GACGAATGGA TCGAGAAAGG CTGGGTGCTC GTCGACGGCG AGCGCATCGA CACGCTCGGC
ACGAAGGTGC GCGCCGACCA GCGCATCGAG ATCGATTCGA ACGCGCGTGC CGCGCAGGCC
GCGCAAGTGA CGATCCTGCT GCACAAGCCG GTGGGCTACG TGTCGGGCCA GGCGGAGGAC
GGCTACGCCC CCGCCGCGAC GCTCGTCACG CGCGAGAACC ACTGGAGCGG CGACCGCTCG
CCGCTGCGCT TCTCGCCGCA GCACCTGCGC GCGCTCGCGC CCGCGGGCCG GCTCGACATC
GATTCGACGG GCCTTCTCGT GCTGACGCAG AACGGGCGCG TCGCGAAACA GCTGATCGGC
GAACAATCGG ACATCGACAA GGAATACCTG GTGCGCGTGC GCTTCGGCGA GCGCACGGCC
GACATCGAAC GCCACTTCCC CGCCGAGTCG CTCGCGAAGC TGCGCCACGG CCTCGAACTC
GACGGCGTGC CGCTCAAGCC CGCGATGGTC AGTTGGCAGA ACGGCGAGCA ACTGCGCTTC
GTGCTGCGCG AAGGCAAGAA GCGCCAGATT CGCCGGATGT GCGAACTCGT CGGCCTCGAG
GTGATCGGCC TGAAGCGCGT GCGGATGGGC CGCGTGATGC TGGGCGCGCT GCCGCAAGGC
GAGTGGCGCT ATCTCGGGCC GGACGAATCG TTCTGA
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| Protein sequence | MRTKLTVKNP RPATPGRAPV RSGSLTARKV ARPDPKAAGA KPAAAKPAAK SASAAKPAAP
RGAANAAPKR APGPSHPAAA SEGKRVAKPR AAHDAGRTGG ERAPAKRATA PGAPGAASAP
RTRRTDAKPA RRTDERPAGR AGNRPAGRDE RAPRDSDARA FDAGTRGKDR APREGARPGA
RGATGAKFGG AARRSDDADR RTPRATRADS RARDAAPSSF AGKTTTAGKR APQRADDRYG
AAGKRTSPRP ERTERTARFG ERPATRASAS GERRPTARAA TGSRLKLAQP IKRGSGELGE
SARGGEHGER GKRIERGDET GLVRLSKRMS ELGLCSRREA DEWIEKGWVL VDGERIDTLG
TKVRADQRIE IDSNARAAQA AQVTILLHKP VGYVSGQAED GYAPAATLVT RENHWSGDRS
PLRFSPQHLR ALAPAGRLDI DSTGLLVLTQ NGRVAKQLIG EQSDIDKEYL VRVRFGERTA
DIERHFPAES LAKLRHGLEL DGVPLKPAMV SWQNGEQLRF VLREGKKRQI RRMCELVGLE
VIGLKRVRMG RVMLGALPQG EWRYLGPDES F
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