| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BURPS1106A_2422 |
|---|
| Symbol | |
|---|
| ID | 4901051 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Burkholderia pseudomallei 1106a |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009076 |
|---|
| Strand | - |
|---|
| Start bp | 2383689 |
|---|
| End bp | 2385191 |
|---|
| Gene Length | 1503 bp |
|---|
| Protein Length | 500 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 70% |
|---|
| IMG OID | 640135650 |
|---|
| Product | hydroxydechloroatrazine ethylaminohydrolase |
|---|
| Protein accession | YP_001066682 |
|---|
| Protein GI | 126454025 |
|---|
| COG category | [F] Nucleotide transport and metabolism
[R] General function prediction only |
|---|
| COG ID | [COG0402] Cytosine deaminase and related metal-dependent hydrolases |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 7 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | TTGTTCGAGC GTTCGAACAT TCGAGCACAA GCGGCCGCCT CGGCGGCGCA ACGACACGGA
GATCGAACGA CGATGGAACG ACACCCGAGC GCGCGAGCCG GCGCGCACTC CCTATCCCAG
CCCCCCTCCC TTTCCCCGAA CCGATCGAAG ACGCTCGTCG TCAAGCACGC CGACGTGCTC
GTGACGATGG ACGGCGCGCG CCGCGAACTG CGCGATGCGG GCCTGTATGT CGAGGACAAC
CGGATCGTCG CGGTCGGCCC GAGCGCCGAG TTGCCCGAGC AGGCGGACGA AGTGCTCGAT
CTGCGCGGGC ATCTCGTGAT CCCGGGGCTC GTCAACACGC ATCATCATAT GTATCAGAGC
CTCACGCGCG CGATTCCCGC CGCGCAGAAC GCCGAGCTGT TCGGCTGGCT CACGAATCTA
TACCGGATCT GGGCGCATCT GACGCCGGAG ATGATCGAGG TATCGGCGCT GACCGCGATG
GCCGAGCTGC TGCTGTCCGG CTGCACGACG TCGAGCGATC ATCTGTACAT CTATCCGAAC
GGCAGCCGGC TCGACGACAG CATCGCGGCC GCGCGGCGCA TCGGCATGCG CTTTCACGCG
AGCCGCGGCA GCATGAGCGT CGGGCAGCGC GACGGCGGGT TGCCGCCCGA TGCGGTCGTC
GAGCGCGAGG CGGACATCCT GCGCGATACG CAGCGCGTGA TCGAGACCTA CCATGACGAA
GGCCGCTATG CGATGCTGCG TGTCGCCGTC GCGCCGTGTT CGCCGTTCTC GGTGAGCCGC
GGCCTGATGC GCGACGCGGC GGCGCTCGCG CGCGAGCACC GCGTGTCGCT GCACACGCAC
CTAGCGGAGA ACGTGAACGA CGTCGCGTAC AGCCGCGAGA AGTTCGGGAT GACGCCGGCC
GAGTATGCGG AGGATCTCGG CTGGGTGGGG CGCGACGTGT GGCACGCGCA TTGCGTGCGG
CTCGACGAGC CCGGCATCGC GCTTTTTGCG CGCACCGGCA CGGGCGTCGC GCATTGCCCT
TGCTCGAACA TGCGGCTGGC GTCCGGGATT GCCCCCATCG CGCGAATGCG GCGCGCGGGC
GTGCCGGTCG GGCTCGGCGT CGACGGTTGT GCGTCGAACG ACGGCGCGCA GATGGTGGCC
GAGGCGCGGC AGGCGCTGCT GCTGCAGCGC GTCGGATTCG GGCCGGACGC GCTGAGCGCG
CGCGACGCGC TCGAGATCGC GACGCTCGGC GGCGCGCGCG TGCTGAACCG CGACGACATC
GGCGCGCTCG CGCCGGGCAT GGCCGCGGAT TTCGTCGCGT TCGACCTGCG CACGCCGCAG
TTCGCGGGCG CGCTGCACGA TCCCGTCGCG GCGCTCGTGT TCTGCGCACC GCCGCAGGCG
GCGTACAGCG TCGTCAACGG GCGCGTCGTC GTGCGGGAAG GGCGGCTGAC GACGCTCGAG
ATCGAGCCGC TCGTCGAGCG GCACAACGCG CTGGCTCGCG CGCTTTGTGA CGCGGCGCGC
TGA
|
|---|
| Protein sequence | MFERSNIRAQ AAASAAQRHG DRTTMERHPS ARAGAHSLSQ PPSLSPNRSK TLVVKHADVL
VTMDGARREL RDAGLYVEDN RIVAVGPSAE LPEQADEVLD LRGHLVIPGL VNTHHHMYQS
LTRAIPAAQN AELFGWLTNL YRIWAHLTPE MIEVSALTAM AELLLSGCTT SSDHLYIYPN
GSRLDDSIAA ARRIGMRFHA SRGSMSVGQR DGGLPPDAVV EREADILRDT QRVIETYHDE
GRYAMLRVAV APCSPFSVSR GLMRDAAALA REHRVSLHTH LAENVNDVAY SREKFGMTPA
EYAEDLGWVG RDVWHAHCVR LDEPGIALFA RTGTGVAHCP CSNMRLASGI APIARMRRAG
VPVGLGVDGC ASNDGAQMVA EARQALLLQR VGFGPDALSA RDALEIATLG GARVLNRDDI
GALAPGMAAD FVAFDLRTPQ FAGALHDPVA ALVFCAPPQA AYSVVNGRVV VREGRLTTLE
IEPLVERHNA LARALCDAAR
|
|---|
| |