Gene BURPS1106A_2413 details

Gene Information

• Locus tag: BURPS1106A_2413
• ID: 4900330
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Burkholderia pseudomallei 1106a
• Kingdom: Bacteria
• Replicon accession: NC_009076
• Strand: +
• Start bp: 2376914
• End bp: 2377594
• Gene Length: 681 bp
• Protein Length: 226 aa
• Translation table: 11
• GC content: 67%
• IMG OID: 640135641
• Product: PspA/IM30 family protein
• Protein accession: YP_001066673
• Protein GI: 126453120
• COG category: [K] Transcription; [T] Signal transduction mechanisms
• COG ID: [COG1842] Phage shock protein A (IM30), suppresses sigma54-dependent transcription

Plasmid Coverage information

• Num covering plasmid clones: 8
• Plasmid unclonability p-value: 0.685259
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGTCGCTTT TCGACTCTAT TTCGCGCACG ATCAAAGGTC TGCTGAACGA CGCGGCGGAC 
TCGGTGCAGG ACCCGTCGCG CGACGCGCGG CAGATCGTGC GGGAGCTCGA CGACAGTATC 
GGCCGCGCGG AAAACTCGCT GATCGAGATC GAAGCGCAGG TCGCAACGCA ACGCAGCAAG 
CGCGACACCG CCGACGAGCG CGCGAAAAAG TACGAGGACG GCGCGAAGCG CGCGCTGCAA 
TCCGGCGACG AGGCGCTCGC GCGCGAGGCG CTCGCCGCGC AGGCGAACGC CGAGGCCGAG 
CGCGACGCGC TCGCGCGCGA ACTCGACACG CTCGAGCCGT CGGTCGACAA GCTCAAAGGC 
CAGATCGCCG ACATGCGCGC GCGCCGCAAC GATCTGAACG CGCGCTCGAA CATCCTGCAG 
GCAAAGCAGG AAATCGCGCA GGCGAAGGAC GTCGCGGCCA CCGCACTCGG CGGAATCGGC 
GGCAAGAACC TGTCCGAGGA CTTCCAGAAG CTCGAGGACA AGGTCGCGCT GTCGAACGCG 
CGCTCGGACG CGCGCCTGAA TTCAGCCGAT ACGAACAGCG GCCGCGCGCT CGACGACAAG 
CTCGCGGCGC TGAACAAGGG GCCGTCCGTC GAGGACCGCC TCGAAGCGCT GAAAAAGCAA 
CTGAACACGC CGGCGCAGTA A 

 

Protein sequence

MSLFDSISRT IKGLLNDAAD SVQDPSRDAR QIVRELDDSI GRAENSLIEI EAQVATQRSK 
RDTADERAKK YEDGAKRALQ SGDEALAREA LAAQANAEAE RDALARELDT LEPSVDKLKG 
QIADMRARRN DLNARSNILQ AKQEIAQAKD VAATALGGIG GKNLSEDFQK LEDKVALSNA 
RSDARLNSAD TNSGRALDDK LAALNKGPSV EDRLEALKKQ LNTPAQ