| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BURPS1106A_2326 |
|---|
| Symbol | |
|---|
| ID | 4900383 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Burkholderia pseudomallei 1106a |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009076 |
|---|
| Strand | - |
|---|
| Start bp | 2301943 |
|---|
| End bp | 2302941 |
|---|
| Gene Length | 999 bp |
|---|
| Protein Length | 332 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 72% |
|---|
| IMG OID | 640135555 |
|---|
| Product | zinc-binding dehydrogenase family oxidoreductase |
|---|
| Protein accession | YP_001066590 |
|---|
| Protein GI | 126454508 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG2130] Putative NADP-dependent oxidoreductases |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 3 |
|---|
| Plasmid unclonability p-value | 0.0803814 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGTCACAGG TCAACCGGCG GGTGCTGCTC GTGTCGCGCC CCGAACGCGA GGCGCGCGTC
GAGAACTTCG AACTCGTCGA GACGCCGCTT GCGCCGCTCG CCGTAGGCGA GGTGCGCGTG
CGCAATCATT TTCTGTCGAT CGATCCGTAC ATGCGCGGGC GGATGAACGC GGGGCGCTCG
TACGCCGAGC CGCAACCGCT CGGCGAGGTG ATGGGCGGCG GCACCGCCGG CGAGGTCGTC
GAGTCGCGCA ATCCGGCGTT CGCCCCCGGC GATCGCGTGA TCGGCGCGTA CGGCTGGCAG
GAGTACGGCA CGTCGGCGGG CAAGGAACTG CGCAAGGTCG ACACGACGCG CGTGCCGCTG
TCCGCGTATC TCGGAGCCGC CGGAATGCCC GGCGTGACCG CGTGGTACGG CCTGAACCGG
ATCATCCGGC CGCGCGCGGG CGAGACGCTC GTCGTCAGCG CGGCGAGCGG CGCGGTCGGC
AGCGTGGTCG GGCAGCTCGC GAAGCTCGCC GGGTGTCGCG CGGTCGGCAT CGCGGGCGGC
GCGGACAAGT GCCGCTACGT CGTCGATACG CTCGGCTTCG ATGCGTGCGT CGACTACAAG
GCGGGCCGGC TCGCCGACGA TCTCGCGGCC GCCGCGCCGG ACGGCGTCGA CGGCTGTTTC
GAGAACGTCG GCGGCGCGGT GCTCGATGCG ACGCTCGCGC GGATGAACCC GTTCGGGCGC
ATCGCGATGT GCGGGATGAT CGCCGCGTAC GACGGCGCGC CCGCGCCGCT CGCGAACCCG
GCGCTGATCC TGCGCGAGCG GCTGCTCGTG CAGGGCTTCA TCGTGTCCGA GCACTTCGAC
GTGTGGCCCG AGGCGCTCGC GCAGCTCGCG TCGCTCGTCG CGAACAGGCA GCTGCATTAT
CGGGAGACGA TCGCGCAGGG CCTCGAGCGC GCGCCCGACG CGCTGCTCGG GCTGCTGAAA
GGGCGCAATT TCGGCAAGCA GCTCGTCGCG CTCGTCTGA
|
|---|
| Protein sequence | MSQVNRRVLL VSRPEREARV ENFELVETPL APLAVGEVRV RNHFLSIDPY MRGRMNAGRS
YAEPQPLGEV MGGGTAGEVV ESRNPAFAPG DRVIGAYGWQ EYGTSAGKEL RKVDTTRVPL
SAYLGAAGMP GVTAWYGLNR IIRPRAGETL VVSAASGAVG SVVGQLAKLA GCRAVGIAGG
ADKCRYVVDT LGFDACVDYK AGRLADDLAA AAPDGVDGCF ENVGGAVLDA TLARMNPFGR
IAMCGMIAAY DGAPAPLANP ALILRERLLV QGFIVSEHFD VWPEALAQLA SLVANRQLHY
RETIAQGLER APDALLGLLK GRNFGKQLVA LV
|
|---|
| |