| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BURPS1106A_2278 |
|---|
| Symbol | |
|---|
| ID | 4901919 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Burkholderia pseudomallei 1106a |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009076 |
|---|
| Strand | + |
|---|
| Start bp | 2263797 |
|---|
| End bp | 2264822 |
|---|
| Gene Length | 1026 bp |
|---|
| Protein Length | 341 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 62% |
|---|
| IMG OID | 640135507 |
|---|
| Product | NAD-dependent epimerase/dehydratase family protein |
|---|
| Protein accession | YP_001066542 |
|---|
| Protein GI | 126452402 |
|---|
| COG category | [G] Carbohydrate transport and metabolism
[M] Cell wall/membrane/envelope biogenesis |
|---|
| COG ID | [COG0451] Nucleoside-diphosphate-sugar epimerases |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 6 |
|---|
| Plasmid unclonability p-value | 0.617261 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | GTGAACGGCT TCATCGGTCA TCACCTGTCC AAGCGCATTC TTGAAACCAC CGATTGGGAA
GTGTTCGGCA TGGACATGCA GACCGACCGG CTCGGCGATC TCGTCAAGCA CGAGCGGATG
CATTTCTTCG AAGGCGACAT CACGATCAAC AAGGAGTGGG TCGAGTATCA CGTGAAGAAG
TGCGACGTGA TCCTGCCGCT CGTCGCGATC GCGACGCCCG CCACCTACGT CAAACAGCCG
CTGCGCGTGT TCGAGCTCGA CTTCGAGGCG AACCTGCCGA TCGTGCGCTC GGCCGTCAAG
TACGGCAAGC ATCTCGTGTT TCCGTCGACG TCCGAGGTCT ATGGCATGTG CGCGGACGAG
CAGTTCGACC CGGATGCGTC CGCCCTCACC TACGGCCCGA TCAACAAGCC GCGCTGGATC
TACGCGTGCT CGAAGCAACT GATGGACCGC GTGATCTGGG GCTACGGGAT GGAAGGCCTG
AACTTCACGC TGTTCCGCCC GTTCAACTGG ATCGGCCCGG GCCTCGACTC GATCTACACG
CCGAAGGAAG GCAGCTCGCG CGTCGTCACG CAGTTCCTCG GCCACATCGT GCGCGGCGAG
AACATCAGCC TCGTCGACGG CGGCTCGCAA AAGCGCGCGT TCACGTACGT CGACGACGGC
ATCAGCGCAC TGATGAAGAT CATCGAGAAT TCGAACGGCG TCGCGACGGG CAAGATCTAC
AACATCGGGA ATCCGAACAA TAACTTCTCG GTGCGCGAAC TCGCGAACAA GATGCTCGAG
CTCGCGGCGG AGTTCCCCGA GTACGCCGAT TCGGCCAAGC GCGTGAAGCT CGTCGAGACG
ACCTCGGGCG CGTACTACGG CAACGGCTAT CAAGACGTGC AGAACCGCGT GCCGAAGATC
GAGAACACGA TGCAGGAGCT CGGCTGGGCA CCGCAGTTCA CGTTCGACGA CGCGCTGCGC
CAGATCTTCG AGGCGTACCG CGGCCACGTC GCCGACGCGC GCGCGCTCGT CGAGCAGCAC
GGCTGA
|
|---|
| Protein sequence | MNGFIGHHLS KRILETTDWE VFGMDMQTDR LGDLVKHERM HFFEGDITIN KEWVEYHVKK
CDVILPLVAI ATPATYVKQP LRVFELDFEA NLPIVRSAVK YGKHLVFPST SEVYGMCADE
QFDPDASALT YGPINKPRWI YACSKQLMDR VIWGYGMEGL NFTLFRPFNW IGPGLDSIYT
PKEGSSRVVT QFLGHIVRGE NISLVDGGSQ KRAFTYVDDG ISALMKIIEN SNGVATGKIY
NIGNPNNNFS VRELANKMLE LAAEFPEYAD SAKRVKLVET TSGAYYGNGY QDVQNRVPKI
ENTMQELGWA PQFTFDDALR QIFEAYRGHV ADARALVEQH G
|
|---|
| |