| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BURPS1106A_2255 |
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| Symbol | |
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| ID | 4900972 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia pseudomallei 1106a |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009076 |
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| Strand | + |
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| Start bp | 2241963 |
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| End bp | 2243318 |
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| Gene Length | 1356 bp |
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| Protein Length | 451 aa |
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| Translation table | 11 |
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| GC content | 70% |
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| IMG OID | 640135484 |
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| Product | MATE efflux family protein |
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| Protein accession | YP_001066519 |
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| Protein GI | 126452070 |
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| COG category | [V] Defense mechanisms |
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| COG ID | [COG0534] Na+-driven multidrug efflux pump |
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| TIGRFAM ID | [TIGR00797] putative efflux protein, MATE family |
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Plasmid Coverage information |
| Num covering plasmid clones | 5 |
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| Plasmid unclonability p-value | 0.643752 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGTTCGGCG ACATCCGCCG GATCGCCGGT CTCGCCTGGC CGGTGCTCGT CGGCCAGCTC
GCGATCATCG CGTTCGGCGT GATCGATACC GCGATGGTCG GCCGCTTCTC CGCGCTCGAT
CTCGCGGCGC TCGGGCTCGG CATGTCGATC TATGTGTCGA TCTACATCGG GCTGACGGGC
ATCCTGTCCG CGCTGCAGCC GATCGCGGGG CAACTGTACG GCGCGCGGCG CTACGCGGAG
ATCGGCGAGG AGGTGCGCCA GGCGATGTGG CTCGCGGTGC TGCTCGCCGC GCCCGGCTTT
CTGTTGCTGC ATTTCCCGCA TCCGCTGCTG CGGCTCGCGC ATGCGCCCGC GGAACTGACC
GATCGCACGG TCGCCTATCT GCGCATCCTG TCGTTCGGAC TGCCCGCCAG CCTCCTGTTC
CGCATCTACA ACGCGCTCAC CAACGCGGCG GGCAAGCCGC GGCTCGCGAT GATCCTGCAG
GTGGGCGCGC TCGCCGTCAA AGTGCCGCTC AACCTCTGGT TCATCTTCGG CGGCCTCGGC
GTGCCGGCGC TCGGTGGCCC CGGTTGCGGC CTCGCGAGCA CGCTGATCAA CTGGGCGCTC
GCGATCGTCG GCTTCACGCT GCTCGCGAGG CTCGACGTGT TCGAGCCGCT CGCGATCTTC
GCGCGCTTCA CGCGGCCCGT CTGGCATCGA CAGAAGGCGC TTCTCGTGCT CGGCGTGCCG
ATGGGTCTGT CGTATCTGAT CGAGGTCACG TCGTACACGT TCATGGCGCT GTTCATCGCG
CAGTTCGGCA CGACGACGCT CGCCGGTCAC CAGATCGCCG GCAACATCGG CGCGGTGCTG
TACATGACGC CGTTGTCGAT CGGCGTCGCG TCATCGACGC TCGTCGCGCG CGCGCTCGGC
GCCGGGCGCT TCGACGAAGC CCGCGCGCTC GGCCGGCACG GCGTCGCGCT CGCGTGCGGG
CTCGCGTGCG CGTACGGCAT CGTCGTGTTC GCGCTGCGGC CGCTGATCGT ATCGGGCTAC
ACGCCGAATC CGGCCGTCGC CGCGGCCGCG ATGCCGCTCG TCGCGATCGT CACGGTCTAT
CATTTCTTCG ACGCGCTGCA GATCACGACC GCGTTCGTGC TGCGCGCGCA CAAGGTGGCC
GTCGTGCCGA CCGCGATCTA CGCGATCGCG CTGTGGGGCG TCGGGCTCGG CGGCGGCTAC
CTGCTGGGGT TCGACGTCGG CGGCGCGGTG CCGGCGCAGT TCACCGGCGC GCGCGGCTTC
TGGATCGCGA GCGCGGCGAG CTTGATGCTC GCGGGCGGCG GGCTCGCGCT TTATCTGCGG
CACATCGGAA AGCGGGAAAC GGGTGGCGCG CGGTAG
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| Protein sequence | MFGDIRRIAG LAWPVLVGQL AIIAFGVIDT AMVGRFSALD LAALGLGMSI YVSIYIGLTG
ILSALQPIAG QLYGARRYAE IGEEVRQAMW LAVLLAAPGF LLLHFPHPLL RLAHAPAELT
DRTVAYLRIL SFGLPASLLF RIYNALTNAA GKPRLAMILQ VGALAVKVPL NLWFIFGGLG
VPALGGPGCG LASTLINWAL AIVGFTLLAR LDVFEPLAIF ARFTRPVWHR QKALLVLGVP
MGLSYLIEVT SYTFMALFIA QFGTTTLAGH QIAGNIGAVL YMTPLSIGVA SSTLVARALG
AGRFDEARAL GRHGVALACG LACAYGIVVF ALRPLIVSGY TPNPAVAAAA MPLVAIVTVY
HFFDALQITT AFVLRAHKVA VVPTAIYAIA LWGVGLGGGY LLGFDVGGAV PAQFTGARGF
WIASAASLML AGGGLALYLR HIGKRETGGA R
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