Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | BURPS1106A_2222 |
Symbol | hfq |
ID | 4900182 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Burkholderia pseudomallei 1106a |
Kingdom | Bacteria |
Replicon accession | NC_009076 |
Strand | - |
Start bp | 2211576 |
End bp | 2211815 |
Gene Length | 240 bp |
Protein Length | 79 aa |
Translation table | 11 |
GC content | 54% |
IMG OID | 640135451 |
Product | RNA-binding protein Hfq |
Protein accession | YP_001066486 |
Protein GI | 126452708 |
COG category | [R] General function prediction only |
COG ID | [COG1923] Uncharacterized host factor I protein |
TIGRFAM ID | [TIGR02383] RNA chaperone Hfq |
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Plasmid Coverage information |
Num covering plasmid clones | 8 |
Plasmid unclonability p-value | 0.388443 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAGCAACA AAGGGCAATT GTTACAAGAC CCGTTTTTGA ACGCACTGCG TAAAGAGCAC GTGCCGGTTT CGATCTATCT CGTGAACGGC ATCAAGCTCC AAGGGAACAT CGAATCGTTC GACCAGTACG TCGTGTTGCT CCGGAACACG GTTACCCAGA TGGTTTACAA GCACGCCATT TCGACGGTCG TGCCGGCGCG TCCGGTGAAC TTCCACCCGG ATGCGGAAGC AGCGTCCTAA
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Protein sequence | MSNKGQLLQD PFLNALRKEH VPVSIYLVNG IKLQGNIESF DQYVVLLRNT VTQMVYKHAI STVVPARPVN FHPDAEAAS
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