Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | BURPS1106A_2205 |
Symbol | |
ID | 4900098 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Burkholderia pseudomallei 1106a |
Kingdom | Bacteria |
Replicon accession | NC_009076 |
Strand | - |
Start bp | 2193957 |
End bp | 2195144 |
Gene Length | 1188 bp |
Protein Length | 395 aa |
Translation table | 11 |
GC content | 71% |
IMG OID | 640135434 |
Product | RluA family pseudouridine synthase |
Protein accession | YP_001066469 |
Protein GI | 126454439 |
COG category | [J] Translation, ribosomal structure and biogenesis |
COG ID | [COG0564] Pseudouridylate synthases, 23S RNA-specific |
TIGRFAM ID | [TIGR00005] pseudouridine synthase, RluA family |
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Plasmid Coverage information |
Num covering plasmid clones | 12 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGACCCGTT CAAGTTCGTT GAATGCCCGT GCGGGCAAGT CAAACCGCGA CGATTATAGC CCAAGCGCCA GCCCCGCCGA CGCTTCTGCG GGCGATTCGC TCGACGACGA TCTGACGAGC GACACGCTCG TCGCGCCCGC GCGCGCCGAT ACCGGCGCCG ATGCGCCGCG CACCGTCGAC GTGCCGCTCG CGCTCGCGGG CGAGCGCCTC GACAAGGCGC TCGCGCAGTT GTTTCCCGAG TTCTCGCGCA GCCGCCTGCA GCAGTGGATC GAGTCGGACC GCGTGCGCGT CAGCGGCGCG CCGGCGAAGA TCCGGCAGCC CGTGCCGCTC GGCGCGACGA TCGAGCTGCT GCCCGAGCTG CTGCCCGAGC AACTCGCGTT CACGCCGGAG CCGGTGCCGC TGTCGATCGT CTACGAGGAC GACACGATCG TCGTCGTCGA CAAGCCGGCC GGCCTCGTCG TTCATCCTGC CGCCGGCAAC TGGAGCGGCA CGCTGCTCAA CGGCCTGCTG CACCGCTATG CGGATGCGGC CGGCCTGCCG CGCGCCGGCA TCGTGCATCG GCTCGACAAG GAAACGTCGG GCCTGATGGT CGTCGCCCGC ACGCTTGCCG CGCAGACGGA CCTGATCCGT CAATTGCAGG CGCGCACGGT GAAGCGCCGC TATTTCGCGC TCGCGTGGGG GCGGATGCCC GACGAGGGCA CGATCGATGC GCCGATCGGC CGCGATCCGC GCGAGCGCAC GCGGATGGCG GTTGTCACGG GCGCGGCGGG CAAGCCGGCG CGCACGCATT TCCGCACGGT CGACACGACG CTGTGGGCGC GCCAGCCGGT ATCGGCGATC CATTGTGATC TCGAAACCGG ACGCACGCAT CAGATCCGCG TGCATTGCGC GCACGTCGGG CATCCGCTGC TCGGCGATCC GGTGTACGGC CGCGCGCGCG GCAAGCGCTC GGTCGCGCCG CTGCCGGGCG GCTTCGCGCG GCAGGCGCTG CACGCCTGGC GGCTCGGCCT CGTGCATCCG GCGAGCGGCC GGTCGATGCA ATGGCGCGCG CCGCTGCCGG CCGATCTCGC GGCGCTCGTC GACGCGCTCG GCTTCGGTGC GGACGATGCG GAATTCGGCG ACGATGACGC TGTCTATGAC GACGGTTACG ATGAAGGCAT GCCGTATGCC GACGATGATG AGGATTGA
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Protein sequence | MTRSSSLNAR AGKSNRDDYS PSASPADASA GDSLDDDLTS DTLVAPARAD TGADAPRTVD VPLALAGERL DKALAQLFPE FSRSRLQQWI ESDRVRVSGA PAKIRQPVPL GATIELLPEL LPEQLAFTPE PVPLSIVYED DTIVVVDKPA GLVVHPAAGN WSGTLLNGLL HRYADAAGLP RAGIVHRLDK ETSGLMVVAR TLAAQTDLIR QLQARTVKRR YFALAWGRMP DEGTIDAPIG RDPRERTRMA VVTGAAGKPA RTHFRTVDTT LWARQPVSAI HCDLETGRTH QIRVHCAHVG HPLLGDPVYG RARGKRSVAP LPGGFARQAL HAWRLGLVHP ASGRSMQWRA PLPADLAALV DALGFGADDA EFGDDDAVYD DGYDEGMPYA DDDED
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