Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | BURPS1106A_2203 |
Symbol | phbC |
ID | 4901947 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Burkholderia pseudomallei 1106a |
Kingdom | Bacteria |
Replicon accession | NC_009076 |
Strand | - |
Start bp | 2190783 |
End bp | 2192597 |
Gene Length | 1815 bp |
Protein Length | 604 aa |
Translation table | 11 |
GC content | 68% |
IMG OID | 640135432 |
Product | Poly-beta-hydroxybutyrate polymerase |
Protein accession | YP_001066467 |
Protein GI | 126451661 |
COG category | [I] Lipid transport and metabolism |
COG ID | [COG3243] Poly(3-hydroxyalkanoate) synthetase |
TIGRFAM ID | [TIGR01838] poly(R)-hydroxyalkanoic acid synthase, class I |
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Plasmid Coverage information |
Num covering plasmid clones | 3 |
Plasmid unclonability p-value | 0.384806 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGCAACAGT TGTTCGAGTC CTGGCTCGGC GCGTGGCGCA GCTTCGCGGA CCCGGCCCGG GCGGCCGCGG GCGACGCACC GTCGCCGTCG CCGTCGCCGT TCGCGGCGTT CCAGCCGCCG CAGCCGTTTG CGTTCGCGAT GCCTGCGATG CCGCCGATGC CGCCGATGCC GGATTGGTCC GGCGCGGCCG CGTCGTTCGC GGGGCTCGCG CCCGTCGCGT CGGTGCCGCC CGCGCGGCTG CAGAAGCTGC AGGCCGATTA TTCGCGCGAT TGCCTCGCGC TGATCCAGCA GGCGAGCGCC GCGACGCCGA CCGTTCCCGA GCTGAAGGAC CGGCGTTTCA GCGCGGACGC CTGGAAGGCA TCACCCGCGC ACGGGTTCGC GGCCGCCTGG TATCTGCTGA ACGCGCGCTA CCTGCAGGAG CTCGCGGACG CGCTCGAGAC CGACCCGAAG ACGCGCGAGC GGATCCGCTT CACGGTCCAG CAGTGGACGG CCGCCGCGTC GCCGAGCAAC TTCCTCGCGC TCAATCCGGA GGCGCAGAAG AATCTCGTCG AGACGCAGGG CGAGAGCCTG CGTCTCGGGA TGATGAACCT GCTCGCCGAC ATGCAGCGCG GCAAGATTTC GCAGACGGAC GAATCGCAAT TCGTCGTCGG CAAGAATCTC GCGGTGACGC CGGGCGCGGT CGTCTACGAG AACGATCTGA TCCAGTTGAT CCAGTACACG CCCACGACAG CCACCGTCTT CGAGCGGCCG CTGCTCATCG TGCCGCCGTG CATCAACAAG TTCTACATCC TCGATCTGCA GCCGGAGAAT TCGCTCGTCG CGCACGCGCT GTCGTGCGGC CATCAGGTGT TCCTCGTGTC GTGGCGCAAT GCCGACGCGT CGGTCGCGCA CAAGACGTGG GACGACTACA TCGACGAGGG CCTGCTCGCC GCGATCGACG TCGTCCAGCA GGTGAGCGGG CGCGAGCAGA TCAACACGCT CGGCTTCTGC GTCGGCGGCA CGATGCTTGC GACGGCGCTC GCGGTGCTCG CCGCGCGCGG CGAGCACCCG GCCGCGTCGA TGACGCTGCT CACCTCGATG CTCGACTTCT CCGACACGGG CATTCTCGAC GTGTTCGTCG ACGAGGCGCA CGTGCAGATG CGCGAGCAGA CCATCGGCGG CAAGGGCGGC GCGCCCGCGG GCTTGATGCG CGGCGTCGAG TTCGCGAACA CGTTTTCGTT TCTGCGTCCG AACGATCTCG TGTGGAACTA TGTCGTCGAC AACTACCTGA AGGGCCGCAC GCCCGCGCCG TTCGATCTGC TGTACTGGAA CGGCGATTCG ACGAGCCTGC CCGGCCCGAT GTACGCGTGG TATCTGCGGA ATACCTATCT CGAAAACAAG CTGCGCGAGC CGGATGCGCT CACGGTGTGC GGCGAGCCCG TCGATCTGTC GCGCATCGAC GTGCCGACGT TCATCTACGG CTCGCGCGAG GATCACATCG TGCCGTGGCA GACCGCGTAC GCGTCGACGT CGCTGCTGAC GGGGCCGCTG AAGTTCGTGC TGGGCGCGTC GGGCCACATC GCAGGCGTGA TCAATCCGCC CGCGAAGCGC AAGCGCAGCT ACTGGAGCTA CGACGCGAGC GCGAAGGAGC TGCCGGAATC GGCGAACGAC TGGCTCGATG CGGCCGTCGA GCACCCTGGC AGTTGGTGGC CGGTATGGAT CGAGTGGCTC GATCAGTACG GCGGCAAGAA GGTGAAGCCG CGCGCGCACC TCGGCTGCGC GCGCTTCCCG GTGATCGAGC CCGCGCCCGG CCGATATGTG TTGCAACGCG ATTGA
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Protein sequence | MQQLFESWLG AWRSFADPAR AAAGDAPSPS PSPFAAFQPP QPFAFAMPAM PPMPPMPDWS GAAASFAGLA PVASVPPARL QKLQADYSRD CLALIQQASA ATPTVPELKD RRFSADAWKA SPAHGFAAAW YLLNARYLQE LADALETDPK TRERIRFTVQ QWTAAASPSN FLALNPEAQK NLVETQGESL RLGMMNLLAD MQRGKISQTD ESQFVVGKNL AVTPGAVVYE NDLIQLIQYT PTTATVFERP LLIVPPCINK FYILDLQPEN SLVAHALSCG HQVFLVSWRN ADASVAHKTW DDYIDEGLLA AIDVVQQVSG REQINTLGFC VGGTMLATAL AVLAARGEHP AASMTLLTSM LDFSDTGILD VFVDEAHVQM REQTIGGKGG APAGLMRGVE FANTFSFLRP NDLVWNYVVD NYLKGRTPAP FDLLYWNGDS TSLPGPMYAW YLRNTYLENK LREPDALTVC GEPVDLSRID VPTFIYGSRE DHIVPWQTAY ASTSLLTGPL KFVLGASGHI AGVINPPAKR KRSYWSYDAS AKELPESAND WLDAAVEHPG SWWPVWIEWL DQYGGKKVKP RAHLGCARFP VIEPAPGRYV LQRD
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