Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | BURPS1106A_2195 |
Symbol | metC |
ID | 4903011 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Burkholderia pseudomallei 1106a |
Kingdom | Bacteria |
Replicon accession | NC_009076 |
Strand | - |
Start bp | 2181667 |
End bp | 2182851 |
Gene Length | 1185 bp |
Protein Length | 394 aa |
Translation table | 11 |
GC content | 67% |
IMG OID | 640135424 |
Product | cystathionine beta-lyase |
Protein accession | YP_001066459 |
Protein GI | 126454483 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG0626] Cystathionine beta-lyases/cystathionine gamma-synthases |
TIGRFAM ID | [TIGR01324] cystathionine beta-lyase, bacterial |
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Plasmid Coverage information |
Num covering plasmid clones | 6 |
Plasmid unclonability p-value | 0.681005 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGACCGCAT CCATTCCCAA GCGCGCGTTG CAGACGCGCG TCGTCCAGCC GGACGATCGC ATTCCCGCCG GTTTCGAATC GTTCGTCGTG CCCGTCGCGC GGGCGTCGAC GGTCGTGTTT CCCGATCTCG CGACGATGCG CAATCTCGAC TGGCGCCAGG ACGGCCAATG GCGCTACGGG CTGCACGCGA CGCCGACGTC GCTCGCGCTC GCGCAGCGGC TCGCCGAGAT CGAGGGCGGC GCGCACGCGC TGTTGCAGCC GTCGGGGCTC TGCGCGATCA CGAACGTGTA TTTCGGTCTC GTCAAGGAAG GCGACGATGT GCTGATTCCG GACAATGCGT ACGGGCCGAA CGGCGATTTC GGCAAATGGC TGGCGAAGGA TTTCGGTATC ACCGCGCGCT TCTACGATCC GATGATCGGC GCGGGCATCG CCGATCTGAT CCAGCCGAAC ACGCGCATCG TCTGGCTCGA GGCGCCCGGC TCGGTGACGA TGGAAGTGCC CGACGTGCGG GCGATCACGG CGGTCGCACG CGCACGCGGC ATCGTCACGG CGATCGACAA CACGTATTCG GCGGGCCTTG CGTTCAAGCC GTTCGAGCAC GGGGTCGACA TCTCGGTGCA GGCGCTGACC AAGTACCAGT CGGGCGGCAG CGACGTGCTG ATGGGCGCGA CGATCACCGC CGACGGCGAA CTGCATGCGA AGCTCAAGCT CGCGCGGATG CGGCTCGGCA TCGGCGTGTC GGCCGACGAC TGTTCGCTCG TGCTGCGCGG TCTGCCGAGC ATGCAGGCGC GTTTCGACGC GCACAGCCGC AGCGCCCTGT CGCTCGCGCG CTGGCTGAAG ACGCGCGCGG AGATCGCAAC GGTGCTGCAT CCGCAACTGC CCGATTGTCC GGGCCACGAT ACGTTCATGC GCGACTTCAC GGGCGCGGGC GGGCTGTTCT CGGTCGTGTT CGACGAGCGC TACGATGCCG CACAGGTCGA TCGCTTCGTC GAGGCGCTCG AACTGTTCGC GATCGGCTGG AGCTGGGGCG GCGCATGCAG CCTTGCGATG CCGTACGACG TGCAGTCGAT GCGCACGGGC AAGTGGCCGC ATCGCGGCAC GCTGGTGCGT TTCTATGTCG GTCTCGAAGA CGAGGCCGAT TTGCGCGCGG ATATCGAGCG CGCATTGACG TCGGCGCTCG CATAA
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Protein sequence | MTASIPKRAL QTRVVQPDDR IPAGFESFVV PVARASTVVF PDLATMRNLD WRQDGQWRYG LHATPTSLAL AQRLAEIEGG AHALLQPSGL CAITNVYFGL VKEGDDVLIP DNAYGPNGDF GKWLAKDFGI TARFYDPMIG AGIADLIQPN TRIVWLEAPG SVTMEVPDVR AITAVARARG IVTAIDNTYS AGLAFKPFEH GVDISVQALT KYQSGGSDVL MGATITADGE LHAKLKLARM RLGIGVSADD CSLVLRGLPS MQARFDAHSR SALSLARWLK TRAEIATVLH PQLPDCPGHD TFMRDFTGAG GLFSVVFDER YDAAQVDRFV EALELFAIGW SWGGACSLAM PYDVQSMRTG KWPHRGTLVR FYVGLEDEAD LRADIERALT SALA
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