Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | BURPS1106A_2171 |
Symbol | |
ID | 4902431 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Burkholderia pseudomallei 1106a |
Kingdom | Bacteria |
Replicon accession | NC_009076 |
Strand | - |
Start bp | 2155755 |
End bp | 2157164 |
Gene Length | 1410 bp |
Protein Length | 469 aa |
Translation table | 11 |
GC content | 71% |
IMG OID | 640135400 |
Product | putative sensory box sigma-54 dependent transcriptional regulator |
Protein accession | YP_001066435 |
Protein GI | 126452610 |
COG category | [K] Transcription [T] Signal transduction mechanisms |
COG ID | [COG3829] Transcriptional regulator containing PAS, AAA-type ATPase, and DNA-binding domains |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 7 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGCAGAAT TGGCAGCCAA CGCGGCCGCG GGCCGCGCAG CCGGAGCTCC ATGCATGAAT CAGCGCGACG CCATTCCGAT CGTTCCCATT TCGCCGCCCG ACGTGGGCGT GCTCGTGTCG TACCTCGAGC AGGATCCGCA GCCGATGATC GTGCTCGATC CGTCGTACCG GATCCTCGCG GCGAACGCCG CGTATCAGCG GCAGTTCGGC ATCGCCGGCG AGGCGCACGT CGGGCGGCGC TGCTACCAGG TCTCGCATCA CTACGACATG CCGTGCGACC AGGCGGGCGA GCATTGCCCG ATGAAGCAGG CGGGCGAATC GCGCGGCCTG AACCGCGTGC TGCACATCCA TCACACGCCG CGCGGGCCCG AGCACGTCGA TGTCGAGCTG CGGCCGATCT TCGATGCGCG CGGCGCGGTG ATCGCATACG TCGAGCGGCT GACGACCGTG CGCAGCGCGT CGGCGAAGCC GAGCGGCGAG GGGCTCGTTG GCGGCTCGGA CGCGTTCAAC GCGGCGCTGT CCGCGTTGCA GCGGGTCGCG CCTTCGATGC TGCCCGTGCT GCTGCTCGGC GAATCGGGCA CGGGCAAGGA GCTGTTCGCG CGTGCGTTGC ACGAGGCGAG CGCGCGTGCG ATGGGGCCGT TCGTCGTCGT CGATTGCTCG GGGATTGCCG AGACGCTGTT CGAAAGCGAG CTGTTCGGCT ACGAGAAAGG CGCGTTCACC GGCGCGAGCG CGCGCAAGCC CGGCCTCGTC GAGACCGCGC AGGGCGGCAC GCTGTTTCTC GACGAGATCG GCGACGTGCC GCCGCCGATG CAGGTGAAGC TGCTGCGCCT CATCGAATCG GGGACGTTCC GGCGGGTAGG CGGCGTCGAG GTGCTGCGCG CGGATTTCCG GCTCGTCGCG GCGACTCACA AGCCGCTCAA GGAGATGATC GGCGACGGCA GGTTCCGGCA GGACCTGTAC TACCGGATCA GCGCGTATCC GATTCCGCTG CCCGCCGTGC GCGAGCGCCC GGGCGACATT CCGCTCCTCG TCGATTCGAT CCTGCGCCGG ATCGCGGCGC TCGTGCCCGC AGCCGGGCAG CGCTTCGCGG TCGCGCCGGA GGCGCTCGCG CGGCTCGAAG CGTATGCGTG GCCGGGCAAC ATCCGCGAGC TGCGCAACGT GCTCGATCGC GCGTGCCTGT TCGCCGACGA CGGCGTGATT CGCGTCGAGC ATCTGCCCGA CGAAGTCGCG TGCGCGGGCG AAGCGCCGGC GGGGCCCGGC GCGCCGGCGA AGCTGTCCGA CGACGAGCTC GCGCGGATCG CGCGCGCGTT CGACGGCACG CGGCGCGCGC TCGCCGAGCG CGTCGGGATG AGCGAGCGCA CGCTGTACCG GCGGTTGCGC GCGCTGGGGA TCGCGACGCG GGAGGCGTGA
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Protein sequence | MAELAANAAA GRAAGAPCMN QRDAIPIVPI SPPDVGVLVS YLEQDPQPMI VLDPSYRILA ANAAYQRQFG IAGEAHVGRR CYQVSHHYDM PCDQAGEHCP MKQAGESRGL NRVLHIHHTP RGPEHVDVEL RPIFDARGAV IAYVERLTTV RSASAKPSGE GLVGGSDAFN AALSALQRVA PSMLPVLLLG ESGTGKELFA RALHEASARA MGPFVVVDCS GIAETLFESE LFGYEKGAFT GASARKPGLV ETAQGGTLFL DEIGDVPPPM QVKLLRLIES GTFRRVGGVE VLRADFRLVA ATHKPLKEMI GDGRFRQDLY YRISAYPIPL PAVRERPGDI PLLVDSILRR IAALVPAAGQ RFAVAPEALA RLEAYAWPGN IRELRNVLDR ACLFADDGVI RVEHLPDEVA CAGEAPAGPG APAKLSDDEL ARIARAFDGT RRALAERVGM SERTLYRRLR ALGIATREA
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