| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BURPS1106A_2162 |
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| Symbol | |
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| ID | 4902378 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia pseudomallei 1106a |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009076 |
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| Strand | + |
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| Start bp | 2145588 |
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| End bp | 2146703 |
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| Gene Length | 1116 bp |
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| Protein Length | 371 aa |
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| Translation table | 11 |
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| GC content | 73% |
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| IMG OID | 640135391 |
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| Product | RND family efflux transporter MFP subunit |
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| Protein accession | YP_001066426 |
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| Protein GI | 126453824 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG0845] Membrane-fusion protein |
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| TIGRFAM ID | [TIGR01730] RND family efflux transporter, MFP subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 10 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | GTGAATCGTT CCGGTTCTCG CGCCGCGCTG CTGATCGGCG TCGCGCTCAT CGCCGCCGCC
TGTCATCGCA AGGAAGCCGC GCCGAGCGCG CCGCGCCCCG TCGTCGCAGT GCCGGCGCAG
GCGGACGGCG CGGCCGCCGC CGTGTCGCTG CCCGGCGAAA TCCAGCCGCG CTACGCCACG
CCGCTGTCGT TTCGCATCGC CGGCAAGCTC GTCGAGCGCA AGGTGCGCCT CGGCGACATC
GTGAAGAAAG GCCAGGTCGT CGCGCTGCTC GATACGTCCG ACGTCGCGCG CAGCGCGGCC
AGCGCGCAGG CGCAGCTCGA CGCCGCGACG CACGCGCTGA CGTTCGCGCA GCAGCAGCGC
GAGCGCGATC GCGCGCAGGC GCGCGAGAAC CTGATCGCGC CCGCGCAGCT CGAGCAGACC
GAGAACGCGT ACGCCTCCGC GCGCGCGCAG CGCGACCAGG CCGCGCAGCA GCTCGCGCTC
GCGAAGAACC AGTTGCAGTA CGCGACGCTC GTCGCCGATC ACGCGGGCTA CATCACCGCC
GAGCAGGCCG ACACCGGGCA GAACGTGTCC GCCGGCCAGC CGGTCTATCA GCTCGCGTGG
TCGGGCGACA TCGACGTCGT CACCGACGCA CCGGAAAGCG AACTGCCGCG CCTCGCGCCG
GGCCGCACGG CGCGCGTCAC GCTGCCGGCG CTGCCCGGCC GCGCGTTCGA CGCGCGCGTG
CGCGAGATCG CGCCCGCCGC CGATCCGCAA AGCCGCACGT ACCGCGTGAA GCTCACGCTC
GCGCAGCCCG ATGCGGCGGT GCGGCTCGGG ATGACCGCGA ACGTCGCGCT CTCGCCCGAT
GCGCCGAGCG CCGCGAACGC GCAGCCGCGC TTCACGCTGC CGTCGACGGC GCTCTTTCAT
GCCGGCAACG CGCCCGCGCT GTGGATCGTG CGCAAGCAGG ACGACACGCT CGAGCTGCGG
CGCGTCGACG TCGTGCGCTA CAACGAGCGC ACGGTGACCG TGTCGGGCGG AATTCAGCCG
GGCGAGCGCG TCGTGCTGCA AGGCGTGCAC ACGGTGAGCG CGGGCGAGAA GGTGCGCGCG
GTGCCGCCGC TTCATCCGGA GGACGTCGCG TCATGA
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| Protein sequence | MNRSGSRAAL LIGVALIAAA CHRKEAAPSA PRPVVAVPAQ ADGAAAAVSL PGEIQPRYAT
PLSFRIAGKL VERKVRLGDI VKKGQVVALL DTSDVARSAA SAQAQLDAAT HALTFAQQQR
ERDRAQAREN LIAPAQLEQT ENAYASARAQ RDQAAQQLAL AKNQLQYATL VADHAGYITA
EQADTGQNVS AGQPVYQLAW SGDIDVVTDA PESELPRLAP GRTARVTLPA LPGRAFDARV
REIAPAADPQ SRTYRVKLTL AQPDAAVRLG MTANVALSPD APSAANAQPR FTLPSTALFH
AGNAPALWIV RKQDDTLELR RVDVVRYNER TVTVSGGIQP GERVVLQGVH TVSAGEKVRA
VPPLHPEDVA S
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