| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BURPS1106A_2048 |
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| Symbol | |
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| ID | 4900024 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia pseudomallei 1106a |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009076 |
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| Strand | + |
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| Start bp | 2031294 |
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| End bp | 2032394 |
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| Gene Length | 1101 bp |
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| Protein Length | 366 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 640135278 |
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| Product | outer membrane porin |
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| Protein accession | YP_001066313 |
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| Protein GI | 126454873 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG3203] Outer membrane protein (porin) |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 6 |
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| Plasmid unclonability p-value | 0.569362 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAAAAAGC TCTTGATCGC GCTGCCGCTC GCCGCGGCCG CTACCACCCA CGCCCAGAGC
AGCGTCACGC TATACGGCGT CCTCGAGGAC GGCGTCGACT ATGTGTCGAA CGTGCAGGGT
AAGCATCTCG TGCAGCTCGC GTCGGGCGTG ACGGCCGGCA GCCGCTGGGG CGTGCGCGGT
ACCGAGGATC TCGGCGGGGG CCTGAGCGCG ATCTTCCGGC TCGAAAGCGG CTTCGACATC
AATTCCGGCC GCCTCGGCAG CGGTCTTGCG TTCTCGCGCA ACGCGTACGT CGGCGTCGGC
GACGCGAAGC TCGGCACGCT CACGCTCGGC CGCCAGTGGG ATTCGATCGT CGATTACGTC
GAGCCGTTCA CGCTGAACGG CAACATCGGC GGCTACTACT TCGCGCACCC GAACGACATG
GACAATACCG ACAACGGCTT CCCGATCTCG AACGCGGTCA AGTACCGCAG CCCGACGATC
GCGGGCTTCA CGTTCGGCGG CCTCTACGCG TTCGGCGGCC AGCCGGGCCG CTTTTCGGAC
AACGCGACGT TCAGCGTCGG CGCGAACTAC GCGGCGGGCC CGGTCGGCTT CGGCATCGGC
TATTTGCGGA TCAACAATCC GGGCGTATCG ACGCAGGGTT ACCAGAACTA TCCGGGCTTC
ACGAACGCGG TGTACGGCAA CTATCTCGAC GCGGCACGTG CTCAGAAGGT GTTCGGCGTC
GGCGCGTCGT ACCAGGTCGT GCAATGGCTG AAGCTGCTGG CCGATTTCAC GAACACGAAC
TTCCAGCAAG GCAGCGCGGG ACATGATGCG ACCTTCCAGA ACTATGAGCT GTCGGCGCTC
GTCAAGCCGA CGCCCGCGGT AACGATCGGC GCGGGCTATA CGTACACAAC GGGCCGCGAC
CACGCGACGA ATGCGGAGCC GAAGTATCAT CAGTTCAACC TGAGCGTTGA ATACGCGCTG
TCCAAGCGCA CGAGCGTCTA TGCGATGGGT GCGTTCCAGA AGGCGGCGGG GGATGCACCG
GTCGCGCAGA TCGCGGGTTT CAATCCGTCG GGCAACCAGA AGCAGGCGGT CGGGCGAGCC
GGTATCCGCC ACGTGTTCTG A
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| Protein sequence | MKKLLIALPL AAAATTHAQS SVTLYGVLED GVDYVSNVQG KHLVQLASGV TAGSRWGVRG
TEDLGGGLSA IFRLESGFDI NSGRLGSGLA FSRNAYVGVG DAKLGTLTLG RQWDSIVDYV
EPFTLNGNIG GYYFAHPNDM DNTDNGFPIS NAVKYRSPTI AGFTFGGLYA FGGQPGRFSD
NATFSVGANY AAGPVGFGIG YLRINNPGVS TQGYQNYPGF TNAVYGNYLD AARAQKVFGV
GASYQVVQWL KLLADFTNTN FQQGSAGHDA TFQNYELSAL VKPTPAVTIG AGYTYTTGRD
HATNAEPKYH QFNLSVEYAL SKRTSVYAMG AFQKAAGDAP VAQIAGFNPS GNQKQAVGRA
GIRHVF
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