| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BURPS1106A_2044 |
|---|
| Symbol | |
|---|
| ID | 4900437 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Burkholderia pseudomallei 1106a |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009076 |
|---|
| Strand | + |
|---|
| Start bp | 2027478 |
|---|
| End bp | 2028800 |
|---|
| Gene Length | 1323 bp |
|---|
| Protein Length | 440 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 69% |
|---|
| IMG OID | 640135274 |
|---|
| Product | MFS transporter, metabolite:H+ symporter (MHS) family protein |
|---|
| Protein accession | YP_001066309 |
|---|
| Protein GI | 126453686 |
|---|
| COG category | [G] Carbohydrate transport and metabolism |
|---|
| COG ID | [COG2814] Arabinose efflux permease |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 10 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | GTGAAGCAAT CCGCAGTTCC CCTCGACACG GGCACGGCCG TGTCGCCCCC TACGTCGAGC
GCCGGGCGAG CAATCGCCGC GGCGTCGATC GGCAACGCGC TCGAGTGGTA CGACTTTTCC
GTCTATGCAT TCTTCGCCGT CTACATCGCG CGGAACTTCT TCCATCGAGG CAACACCGGC
ACCGAGCTGG TCGAGGCTTT CATGGCGTTC GGCATCGGCT TCATCGCACG GCCGCTCGGC
GCGCTCGCGA TCGGCGTATA CGGCGACCGC GCGGGCCGCA AGGCCGCGCT CACGCTGACC
ATCCTCGTGA TGGCAACCGG CACGGGCGTC ATCGCGTTCG CGCCGCCATA CGCCGCGATC
GGCGTGGGCG CGCCGCTGCT GATCCTCTGC GGGAGGCTAC TGCAGGGCTT CTCGGCGGGC
GGCGAAGTGG GCGGCGCGGC GGCGTTTCTC ATCGAGCACG CGCCGGCGGA CCGCAAGGGC
TGCTACGCGT CGTGTCTGCA GGCGAGCATG GCCGCGTCGA ACATCCTCGG CGCGCTGGTC
GCGACCGGCG TGACGCTTAC GCTGACGCGC GAACAGATCG GCGATTGGGG ATGGCGGATT
CCGTTCATCC TCGGCCTCGC GATCGCGCCG GTCGGCCTCT GGCTGCGCAG GACGCTCGAC
GAGACGCCGC ACTTCCGCGC CGAGATGGCG CGCGCGCAGC ACGCGCATGC GGAACAGAAA
GCGCCGCTTC TGCAGGTGGT GCGCGACCAC CCGCGCGCGC TCGCCGTCGG CACGGGATTC
TCGGTGCTCT GGGCCGTGTG CGTCTACGCG CTGGTGATCT ATATGCCGAC GCACGCGCAG
CGCGCACTGC ATTTCGACGG GCGCGACGCG TTCATCGCGT CGCTGGTCGG CAACTGCCTG
ATGGCCGTCA CCTGCGTGTG CGCGGGAAGC TGGTCCGACC GCCTCGGCCG GCGCACGGTG
CTCGCCGCCG GCGCGGCGCT GATGCTCGTG TCGGTCTATC CGCTGCTGCG CTGGCTGAGC
GACGTGCACA CGCTCGCCGC GCTCCTTACC GTCCAGAGCG CGTTCTGCGT GTTGGTGGCC
ATCTTCACGG GAGTGGCGCC CGCAGCGCTG TCGGAGCTGT TCCCGACCCG CGTACGTGCG
ACCGGCATGT CCCTGTCCTA CAACATCGCC ACGACGATCT TCGGCGGCTT CGCGCCCGCG
ATCCTCGCAT GGCTCACGCA ACAGACCGGC AATCCGTTTG CGCCGGCCTG GTACGTGATG
GTGGCGAGCG CCATCGCGCT CGCATCGATC GCCGCGCTTT CTTCCACGCC ACGCCACGCC
TGA
|
|---|
| Protein sequence | MKQSAVPLDT GTAVSPPTSS AGRAIAAASI GNALEWYDFS VYAFFAVYIA RNFFHRGNTG
TELVEAFMAF GIGFIARPLG ALAIGVYGDR AGRKAALTLT ILVMATGTGV IAFAPPYAAI
GVGAPLLILC GRLLQGFSAG GEVGGAAAFL IEHAPADRKG CYASCLQASM AASNILGALV
ATGVTLTLTR EQIGDWGWRI PFILGLAIAP VGLWLRRTLD ETPHFRAEMA RAQHAHAEQK
APLLQVVRDH PRALAVGTGF SVLWAVCVYA LVIYMPTHAQ RALHFDGRDA FIASLVGNCL
MAVTCVCAGS WSDRLGRRTV LAAGAALMLV SVYPLLRWLS DVHTLAALLT VQSAFCVLVA
IFTGVAPAAL SELFPTRVRA TGMSLSYNIA TTIFGGFAPA ILAWLTQQTG NPFAPAWYVM
VASAIALASI AALSSTPRHA
|
|---|
| |