Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | BURPS1106A_2012 |
Symbol | |
ID | 4900666 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Burkholderia pseudomallei 1106a |
Kingdom | Bacteria |
Replicon accession | NC_009076 |
Strand | + |
Start bp | 1974960 |
End bp | 1975844 |
Gene Length | 885 bp |
Protein Length | 294 aa |
Translation table | 11 |
GC content | 60% |
IMG OID | 640135242 |
Product | JmjC domain-containing protein |
Protein accession | YP_001066277 |
Protein GI | 126453337 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 11 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGCCGTACG ATGAAATTCT GCCTATTGAA ACGCTGGTTC GACCCAAAGT ATCGGACTTC CGCGAGCATT ACCTCGAAAA AGAGCGCCCG GTGAAAATCG CGAGGGCGCT CGATGCGTGG CCGGCGATGC AGAAATGGTC GCTCGACTAT TTCGAGAATC GTTTCGGCGA CGAGACCATC GGCGTCGAGA GCTTTCAGCC TGACGAGCGC GGGCCCGGCA ACAACAGCCC GCAAGGTTAC GTCAAGCACT TGCGTTTCCA GGAGCTCAAG CTCAAGGAAC TGATCCGGAT CCTGCGAACG AAGCCGGACC ACATGTACTA CATGGCGTCG CATCCGTTTC GCAAGAGCTT TCCGAACCTG CGCGCCGATC TCGCGCCGCA TCCGTATGTG CAGGGGCATA TCGAGCACAT CCCGGGTGCG CACATGGATT CGTACCTGTG GATCGGGCCG GCCGGCACGC ATACGCCGAT CCACACCGAT CCGATGCCGA ATTTCCTCAC GCAGATCGTG GGCCGGAAGA TGGTGTATCT GTTCCCGCCG GATCAGGCCA GCAAGAACCT CTATATCGGC CAGTTCGAGC GCGAGACGTT CAGTCCGGTG GATTTGGAGA AGCCGGATCT CGAGCGCTAT CCGAACTACC GGCACTGCAC GCCGTACCGG GCGATCATCG AGCCGGGCGA GACGCTGCAC ATTCCGCGCA ACTGGGGGCA CTGCGTGATC TCGATGGATA TCTCGATTTC CATCAGCACG TTCTTCATCA CGTATCCGCA GCTGTTTCGC CTGGTGCCCG AATTCTTCAC CCAATACGTG AAGCGGGCGT TCGAGGGCTG GCGCTGGAAG GGCATGGAAA ACGAGCGGGC CGGCCTGAAT CCGCCCCCGC GCTAA
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Protein sequence | MPYDEILPIE TLVRPKVSDF REHYLEKERP VKIARALDAW PAMQKWSLDY FENRFGDETI GVESFQPDER GPGNNSPQGY VKHLRFQELK LKELIRILRT KPDHMYYMAS HPFRKSFPNL RADLAPHPYV QGHIEHIPGA HMDSYLWIGP AGTHTPIHTD PMPNFLTQIV GRKMVYLFPP DQASKNLYIG QFERETFSPV DLEKPDLERY PNYRHCTPYR AIIEPGETLH IPRNWGHCVI SMDISISIST FFITYPQLFR LVPEFFTQYV KRAFEGWRWK GMENERAGLN PPPR
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