| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BURPS1106A_1995 |
|---|
| Symbol | |
|---|
| ID | 4901946 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Burkholderia pseudomallei 1106a |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009076 |
|---|
| Strand | - |
|---|
| Start bp | 1958330 |
|---|
| End bp | 1959268 |
|---|
| Gene Length | 939 bp |
|---|
| Protein Length | 312 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 68% |
|---|
| IMG OID | 640135225 |
|---|
| Product | amine ABC transporter, periplasmic amine-binding protein |
|---|
| Protein accession | YP_001066260 |
|---|
| Protein GI | 126452444 |
|---|
| COG category | [M] Cell wall/membrane/envelope biogenesis |
|---|
| COG ID | [COG1732] Periplasmic glycine betaine/choline-binding (lipo)protein of an ABC-type transport system (osmoprotectant binding protein) |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 6 |
|---|
| Plasmid unclonability p-value | 0.380777 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAAAGTTC CCCGTTTCAG CCGTACCCTG CGCGCGGCCG CCGCCGCGCT CGCCGTTTCC
CTCTGCGCGG CCGCGCCCGG CGCGCGCGCC GCCGGCGCGG TCACCGTCGC GTCGAAGATC
GATACCGAAG GCAACCTGCT CGGCAACGTG ATCTCGCAGG TGCTCAAGGC CCACGGAATC
GCCGTCGTCG ACAAGATCGG GCTCGGCGCG ACGCCGATCG TCCGCCGGGC GCTGACGACA
GGCGAAATCG ACATCTACCC GGAATACACG GGCAACGCCG CGTTCTTCTT CAACAAGGCC
GACGATCCCG CGTGGAAGAA CGCCGCGCAA GGCTACGCGC TCGCCAGGCA GCTCGATTAC
GCGGCAAACC GGATCGTCTG GCTCGCGCCC GCGCCCGCGA ACAACACATG GGGTGTCGCG
GTGCTCAACT CGATCGCGCA GGCGCGGCAT CTGAAGACGT TCAGCGATTT CGGCAAGTGG
GTCGCCGCGG GCGGCAAGGT GAAGCTCGCC GCGTCGGCCG AGTTCGTCAA CAGCGCATCC
GCGCTGCCGT CGTTCGAGAA GGCGTACGGC TTCAAACTGA AGCCGGAGCA GATGCTCGTG
CTGTCGGGCG GCGACACCGC GGCGACGATC AAGGCCGCCG CGCAGCAGAC GGACGGCGTG
AACGCCGCGA TGGTCTATGG CACCGACGGC GGCATCGCGG CCACCGGGCT CGCGGTGCTC
GACGACGACA AGCACGTGCA GCCCGTCTAC GCGCCCACGC CGATCATCCG CGAGGCGGTG
CTCAACGCGC ATCCGCAGAT CGCCGACTAC CTGAAGCCCG TGTTCGCGAG CCTCGACCTG
AAGACGCTGC AAGCGCTCAA CGCGCGAATC CAGATCAACG GCGAGCCGGC CGCGGGCGTC
GCGGCGAGCT ATCTGAAAGC GAAGGGCTTC GTCAAATGA
|
|---|
| Protein sequence | MKVPRFSRTL RAAAAALAVS LCAAAPGARA AGAVTVASKI DTEGNLLGNV ISQVLKAHGI
AVVDKIGLGA TPIVRRALTT GEIDIYPEYT GNAAFFFNKA DDPAWKNAAQ GYALARQLDY
AANRIVWLAP APANNTWGVA VLNSIAQARH LKTFSDFGKW VAAGGKVKLA ASAEFVNSAS
ALPSFEKAYG FKLKPEQMLV LSGGDTAATI KAAAQQTDGV NAAMVYGTDG GIAATGLAVL
DDDKHVQPVY APTPIIREAV LNAHPQIADY LKPVFASLDL KTLQALNARI QINGEPAAGV
AASYLKAKGF VK
|
|---|
| |