| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BURPS1106A_1977 |
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| Symbol | |
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| ID | 4902143 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia pseudomallei 1106a |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009076 |
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| Strand | - |
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| Start bp | 1943286 |
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| End bp | 1944584 |
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| Gene Length | 1299 bp |
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| Protein Length | 432 aa |
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| Translation table | 11 |
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| GC content | 69% |
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| IMG OID | 640135207 |
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| Product | putative transporter, periplasmic substrate-binding protein |
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| Protein accession | YP_001066242 |
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| Protein GI | 126452565 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0683] ABC-type branched-chain amino acid transport systems, periplasmic component |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 4 |
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| Plasmid unclonability p-value | 0.212694 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | GTGCGCGACG CTCGCCGCAC CGCGCACGGC GCATCACGAG AACCCGAACG CGCGGCGAGT
TTCCCGACGG GCGCGCCCAC TGTGTCGATC CATGCCGAAA GCGATTGGGC ATCCGAACCG
ATCGATTCGT TTGAGGCCGC CCGGCAATCG AAAATCGTGA CGTTTTCTCG AGCGAGGGTC
GACATGAACG TTCGCATGGG GTGTTTATCG CTGCTGGCCG CCGTCGCATT CGACGCGCAC
GCGCAATCAT CGGTCGTCCG GATCGGCGTC GCGATGCCGC TGACGGGGCC CGTCGCCCAT
CTGGGCAAGG ACGTGCAGAA CGGCGCGCAG CTCGCCGTCG ACGAGCTGAA CCGCGCGCCG
CCGACGATCG ACGGCAAGCC GGTGAAGTTC GTGCTCGTCG TCGAAGACGA TCAGGGCGAT
CCACGGCAGG CGGTGCAGGT CGCGCAGCGC CTCGTCGACG CGCGGGTCGC GGGCGTCGTC
GGCGATCTGA ACTCGGGGCC GACGATCGTC GCGGCGAAGG TCTACGCGGC GGCCGGCATC
GCGCAGATCG CGCCCGCCGC GACCCATTCC GCGTACACGC AGCTAGGCTA CAAGACCGCG
TTCCGGCTGA TGGCGACCGA CAACCAGCAA GGCGCGTCGC TCGCCGGGCT CGCCGCGAAG
CTCGCGAAAG GCCGGCCGAT CGCGCTGATC GACGATCGCG GCGCCTACGG CCAGGGCCTC
ATCGATCAGA CGGAGAAGAC ACTGCGCGCG AGCGGCGTCA CGCGAATCAT CCGCGACTAC
ACGACGGACA CCGCGGTCAA TTTCGCGTCG ATTCTCACGC GCGTGAAGGG CGCGCATGCG
GCCGTGATCG TCTACGGCGG CGCCGATGCA CAGGCGGGGC CGATGGTGCG GCAGATGAAG
GCGCTCGGAA TCGACGCGGC GTTCGTCGGC AGCGACGGCG TGTGCACCGG GCAGTGGACG
GCGCTGTCGT CGGGCGCGAA CGAAGGCCAG TTCTGCACGC AAGCAGGCGA CCCGCGCGCG
AGGATGGCGG GTTACGCGGC GTTCGAGCGG CGTTTCGAGG CGCGCTACGG CAAGGTGATC
GTGTTCGCGC CGTATGGCTA CGACGCGGTG ATGCTGCTCG CCGACGCGAT GCGGCGCGCG
AATTCGACCG AGCCGGCCGC TTTGCTCGGC GCGCTCGCGA CGACCCGTTA CGACGGCGTG
ATCGGCCGCA TCCGCTTCAG TCCGCAGGGC GACAACCTGA ACGGCGCGGT GACGGTCTAC
CGCGTGCAGC GCGGCGCGCT CGTGCCGGTG TCCGACTGA
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| Protein sequence | MRDARRTAHG ASREPERAAS FPTGAPTVSI HAESDWASEP IDSFEAARQS KIVTFSRARV
DMNVRMGCLS LLAAVAFDAH AQSSVVRIGV AMPLTGPVAH LGKDVQNGAQ LAVDELNRAP
PTIDGKPVKF VLVVEDDQGD PRQAVQVAQR LVDARVAGVV GDLNSGPTIV AAKVYAAAGI
AQIAPAATHS AYTQLGYKTA FRLMATDNQQ GASLAGLAAK LAKGRPIALI DDRGAYGQGL
IDQTEKTLRA SGVTRIIRDY TTDTAVNFAS ILTRVKGAHA AVIVYGGADA QAGPMVRQMK
ALGIDAAFVG SDGVCTGQWT ALSSGANEGQ FCTQAGDPRA RMAGYAAFER RFEARYGKVI
VFAPYGYDAV MLLADAMRRA NSTEPAALLG ALATTRYDGV IGRIRFSPQG DNLNGAVTVY
RVQRGALVPV SD
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