| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BURPS1106A_1926 |
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| Symbol | |
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| ID | 4900943 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia pseudomallei 1106a |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009076 |
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| Strand | + |
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| Start bp | 1881329 |
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| End bp | 1882075 |
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| Gene Length | 747 bp |
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| Protein Length | 248 aa |
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| Translation table | 11 |
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| GC content | 73% |
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| IMG OID | 640135156 |
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| Product | short chain dehydrogenase |
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| Protein accession | YP_001066191 |
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| Protein GI | 126454530 |
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| COG category | [I] Lipid transport and metabolism
[Q] Secondary metabolites biosynthesis, transport and catabolism
[R] General function prediction only |
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| COG ID | [COG1028] Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 2 |
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| Plasmid unclonability p-value | 0.00605891 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAGCGTCG CTTTCGATTT CCACGGCCGG TCGTTCCTCG TGACGGGCGC ATCGAGCGGC
ATCGGCCGCG CCGCGGCCGT CGCGCTGCGC GGCTGCGGCG CGCGCGTCGT CGCCGCCGCG
CGCAACGCGC GCGAGCTCGA GCGGCTCGCG CACGAAACGG GCTGCGAGCC GCTCGAGCTC
GACGTCGGCT GCGATGCGTC GGTGCGCGCG GCGCTTTCCA GCGAACGGAT GCGCGATGCG
TTCGACGGGC TGATCAATTG CGCGGGCGTG ACGAGCCTTG CCGCGGCGAT CGACACGACG
GCCGACGAAT TCGACCGCGT GATGGCCGTC AACGCGCGCG GCGCGATGCT GGTCGCGCGG
CATGTCGCGC GCGCGATGAT TCGCGCGGGG CGGGGCGGCA GCATCGTCAA CGTATCGAGC
CAGGCGGCGC TCGTCGCGCT GCCGTCGCAT CTCGCCTACT GCGCGTCGAA GGCCGCGCTC
GACGCGATGA CGCGCGTGCT GTGCGTGGAG CTCGGGCCGC ACGGCATTCG CGTGAACAGC
GTCAACCCGA CCGTCACGCT CACGCCGATG GCCGAGCGCG CGTGGAGCGA TCCGCACGCG
AGCGGGCCGA TGCTCGCGGC GATTCCGCTC GGGCGCTTCG CGCGCGTCGC GGACGTCGTC
GCGCCGATCC TGTTCCTGTC GAGCGACGCG GCGGCGATGG TGAGCGGCGT CGCGCTGCCG
GTGGACGGCG GCTACACCGC GCGATAG
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| Protein sequence | MSVAFDFHGR SFLVTGASSG IGRAAAVALR GCGARVVAAA RNARELERLA HETGCEPLEL
DVGCDASVRA ALSSERMRDA FDGLINCAGV TSLAAAIDTT ADEFDRVMAV NARGAMLVAR
HVARAMIRAG RGGSIVNVSS QAALVALPSH LAYCASKAAL DAMTRVLCVE LGPHGIRVNS
VNPTVTLTPM AERAWSDPHA SGPMLAAIPL GRFARVADVV APILFLSSDA AAMVSGVALP
VDGGYTAR
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