Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | BURPS1106A_1903 |
Symbol | amrA |
ID | 4901164 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Burkholderia pseudomallei 1106a |
Kingdom | Bacteria |
Replicon accession | NC_009076 |
Strand | + |
Start bp | 1855788 |
End bp | 1856987 |
Gene Length | 1200 bp |
Protein Length | 399 aa |
Translation table | 11 |
GC content | 74% |
IMG OID | 640135133 |
Product | periplasmic multidrug efflux lipoprotein precursor |
Protein accession | YP_001066168 |
Protein GI | 126451999 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG0845] Membrane-fusion protein |
TIGRFAM ID | [TIGR01730] RND family efflux transporter, MFP subunit |
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Plasmid Coverage information |
Num covering plasmid clones | 1 |
Plasmid unclonability p-value | 0.00844359 |
Plasmid hitchhiking | No |
Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAAATACG AATGGGCACG CACGCGCCGC TTGTCGGCGG CGCTCGCGGT CGCGGCGTTC GTCGCGGCCG GCTGCGGCAA GCACGAAAGC GAGCACGACG CCGCCGCGCC GCGCGAGGCG AGCGTCGTCA CGGTGAAGAA GACATCGGTG CCGCTGTCGG TCGAATTGCC GGGCCGGCTC GACGCGTACC GGCAGGCCGA GGTGCGCGCG CGGGTCGCGG GCATCGTGAC CGCGCGCACC TACGAGGAAG GGCAGGAAGT CAAGCGCGGC GCGGTGCTGT TCAGGATCGA TCCCGCGCCG TTCAAGGCGG CGCGCGACGC GGCCGCGGGC GCGCTCGAGA AGGCGCGGGC CGCGCACCTC GCGGCGCTCG ACAAGCGCCG CCGCTATGAC GAGCTCGTGC GCGACCGCGC GGTCAGCGAG CGCGACCACA CCGAGGCGCT CGCCGACGAA CGGCAGGCGA AGGCGGCCGT CGCGTCGGCG AGCGCGGAGC TCGCGCGCGC GCAACTGCAG CTCGATTACG CGACCGTCAC CGCGCCGATC GACGGCCGCG CGCGCCGCGC GCTCGTGACC GAAGGCGCGC TCGTCGGCCA GGATCAGGCG ACGCCGCTCA CGACCGTCGA GCAGCTCGAT CCGATCTACG TGAACTTCTC GCAGCCCGCG GCCGACGTCG AATCGCTGCG GCGCGCGGTG AAGAGCGGAC GCGCGGCGGG CATCGCGCAG CAGGACGTCG AGGTGACGCT CGTGCGCCCG GACGGCAGCA CGTACGCGCG CAAGGGCAAG CTGCTGTTCG CGGATCTTGC CGTCGACCCG TCCACCGACA CGGTGGCGAT GCGTGCGCTC TTTCCGAACC CGGAGCGCGA ACTGCTGCCC GGCGCGTACG TGCGGATCGC GCTCGATCGC GCGGTCGCGC GCGACGCGAT CCTCGTGCCG CGCGACGCGC TGCTGCGCAC GGCCGACAGC GCGACCGTCA AGGTCGTCGG CCAGAACGGC AAGATACGCG ACGTGACGGT CGAGGCCGCG CAGATGAAAG GCCGCGACTG GATCGTCACG CGCGGGCTCG CGGGCGGCGA GCGCGTCGTC GTCGTCGACG CCGCGCAATT CGAAGCAGGC ACGACGGTGA AGGCGCTCGA GCGCGGCGCC GCCGCGCAGC CGGCCTCCGG CGCCGCCGCG GCTTCCGCGC CCGGCCGGCG CTCAACCTGA
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Protein sequence | MKYEWARTRR LSAALAVAAF VAAGCGKHES EHDAAAPREA SVVTVKKTSV PLSVELPGRL DAYRQAEVRA RVAGIVTART YEEGQEVKRG AVLFRIDPAP FKAARDAAAG ALEKARAAHL AALDKRRRYD ELVRDRAVSE RDHTEALADE RQAKAAVASA SAELARAQLQ LDYATVTAPI DGRARRALVT EGALVGQDQA TPLTTVEQLD PIYVNFSQPA ADVESLRRAV KSGRAAGIAQ QDVEVTLVRP DGSTYARKGK LLFADLAVDP STDTVAMRAL FPNPERELLP GAYVRIALDR AVARDAILVP RDALLRTADS ATVKVVGQNG KIRDVTVEAA QMKGRDWIVT RGLAGGERVV VVDAAQFEAG TTVKALERGA AAQPASGAAA ASAPGRRST
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