| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BURPS1106A_1898 |
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| Symbol | |
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| ID | 4903038 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia pseudomallei 1106a |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009076 |
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| Strand | + |
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| Start bp | 1851703 |
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| End bp | 1852428 |
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| Gene Length | 726 bp |
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| Protein Length | 241 aa |
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| Translation table | 11 |
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| GC content | 71% |
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| IMG OID | 640135128 |
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| Product | His/Glu/Gln/Arg/opine amino acid ABC transporter permease |
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| Protein accession | YP_001066163 |
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| Protein GI | 126452880 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0765] ABC-type amino acid transport system, permease component |
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| TIGRFAM ID | [TIGR01726] amine acid ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine family |
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Plasmid Coverage information |
| Num covering plasmid clones | 8 |
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| Plasmid unclonability p-value | 0.753826 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGACGCCT GGCTCGCTCC CAAATATCTG ATGTGGTTAT GGCAGGGCTT CCTGCTGACG
CTCGGCCTGT CGCTCGCGGC GGCCGTCACG GCGACGCTCG CGGGCTTCGC GCTCGCGATC
GCCCGGCACG CGAAGCGCGC ATCGCCGCGG CGCGCGGCGG CCGCGTACGT CGTCGCGTTT
CGCAACACGC CGCTCGTCGT GCAGTTGCTG TTCTGGTATT TCGGCGTCGC CGCGCTGCTG
CCCGAGCCGG CGATGGCGTG GCTCAACGCG CCTCATGCGC TCGACGTCGG CGGCCTCGCG
CTGCGCTGGC CGTCGTTCGA GTTCGTCGCG GGCTGGCTCG GCCTGAGCGG CTACACGAGC
GCGTTCGTCG CCGAGGAGTT TCAGGCGGGG CTGCGCGGCG TGCCGGCCGG CCAGCATCAC
GCGGCGAGCG CGCTCGGCCT GTCGCCGCTG CAGGCGTTTC GCTTCGTCGT GCTGCCGCAG
GCGGTGCGCA TCGCGCTGCC GCCGCTCTTC GGCCAGTACA TGAACCTGAT CAAGAACTCG
TCGCTGACGA TGGCGATCGG CGTCGCCGAG CTGTCGTACG CATCGCGCCA AGTCGAGACC
GAGACGTTCA GGACCTTCGC CGCATTCGGC GTGTCGACCG TGCTGTACGT CGCGGCGGTC
GCGCTGGTCG AGGCGGCCGC GCAATGGACG CTGCGGCGGC GCGATCGCAC GTTCGCGGGG
CGCTGA
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| Protein sequence | MDAWLAPKYL MWLWQGFLLT LGLSLAAAVT ATLAGFALAI ARHAKRASPR RAAAAYVVAF
RNTPLVVQLL FWYFGVAALL PEPAMAWLNA PHALDVGGLA LRWPSFEFVA GWLGLSGYTS
AFVAEEFQAG LRGVPAGQHH AASALGLSPL QAFRFVVLPQ AVRIALPPLF GQYMNLIKNS
SLTMAIGVAE LSYASRQVET ETFRTFAAFG VSTVLYVAAV ALVEAAAQWT LRRRDRTFAG
R
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