| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BURPS1106A_1888 |
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| Symbol | |
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| ID | 4900956 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia pseudomallei 1106a |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009076 |
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| Strand | + |
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| Start bp | 1844111 |
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| End bp | 1845682 |
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| Gene Length | 1572 bp |
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| Protein Length | 523 aa |
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| Translation table | 11 |
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| GC content | 71% |
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| IMG OID | 640135118 |
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| Product | type IV pilus assembly protein |
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| Protein accession | YP_001066153 |
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| Protein GI | 126452852 |
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| COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG4962] Flp pilus assembly protein, ATPase CpaF |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 4 |
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| Plasmid unclonability p-value | 0.414931 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGTTCGGCC GGCGTCCGGC CGCTTCATTC GCGCCCGGCG ACGCCGGCGG CGCGCACGAG
TTCGCGCCCG ACGCCGCGCC GGCGGGCGCG GGTGCGGCGC CGGCCGGCGG CCACGCATCG
GCGCCCGACG CGGGCGGCGC GGCACGCGCG CGCGAGCCGG CCGGCGCATC GGGCGCGAGC
GCGCCCGGCG GGGCGCCGCA GTCCGGCGTC GCGCCAAGCG GCCATCGGCC CGCATCGCGT
GACGACCGCA TCGACCGCAT CGATCGCGAT GACGGCCACG ACCGCGCGCC CGCGCAAGAC
CACCACGAGG CGCTGATCCG CTCGGAGACG TTCAAGACGA TCCGCGCGGT CGTGTTCTCG
TCGATGAACA TGTCGGCCGC GCTGATGATG TCGCGCGCCG AAGTGCGCGA AGGCATCGAG
CAGGCGGCCG CCGACGTGAT CGCGCGCGAG CGGCTGACGG TGACGCTCGC CGAGCAGACG
CTCATCGTCG ACGAGATCCT CAACGACATG TTCGGCGTCG GGCCGATCGA GCCGTTGCTC
GCCGACGAAC GCGTGACCGA CATCCTCGTC AACGGCCCCG ATCAGGTGTA CGTCGAGCGC
GCCGGCAAGC TCGAGCTCAC GCCGCTGAAG TTCCGCGACA ACGCGCACGT GATCAACGTC
GCGCAGCGGA TCGCGGCGGC GGTCGGGCGG CGCGTCGACG AGAGCAGCCC GATGGTCGAC
GCGCGGCTCG CGGACGGCAG CCGCGTGAAC GTCGTGCTGC CGCCGATCGC GATCCGCGGC
GCGTCGATCT CGATCCGCAA GTTCGCCAAG CGCAACATCA CGCTCGCGCG GATGGCGCAG
CAGGGCAACC TGTCGCAGGC GATGGTCGAG GTGCTGAAGA TCGCGAGCGC GTGCCGGCTG
AACATCGTGA TCTCGGGCGG CACGGGCTCC GGCAAGACGA CGCTGCTGAA CGCGCTGTCG
CACTTCATCG ATTCGCACGA GCGCATCGTG ACGATCGAGG ACGCCGCGGA GCTGCAATTG
CAGCAGCCGC ACGTCGTGAG CCTCGAGACG CGCCCGGAGA ACAGCGAGGG GCTGGGCGGC
GTGTCGCAGC GCGATCTCGT GCGCAACGCG CTGCGCATGC GCCCCGATCG CATCATCCTC
GGCGAGACGC GCGGCCCGGA GGCGTTCGAC GTGCTGCAGG CGATGAACAC CGGGCACGAC
GGCTCGATGA CGACGATCCA CGCGAACACG CCGCGCGATG CGATCACGCG CCTCGAGAGC
ATGGTGATGA TGGCCAACGG CAACCTGCCG CTCGTGTCGA TCCGCCGGCA GATCGCGAGC
GCGGTGCACA TGATCCTGCA GATCGAGCGC ATGCGCGACG GCGTGCGGCG CGTCACGCGC
GTGACCGAGA TCGCCGGCAT GGAGGGCGAT GTCGTGATCA CGCAGGATCT GTTCGCGTTC
CGCTACGACG CGAGCGCGTT CCAGGAGCAG GTGCACGGAA TGTTCGAATC GTCGTCGCTG
CGCCCGGCGT TCGCGCAGCG CGCCGCGTAT TACGGCCTCG AGGGCGCGCT GCTCGGCGCG
TTGCAGCCGT GA
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| Protein sequence | MFGRRPAASF APGDAGGAHE FAPDAAPAGA GAAPAGGHAS APDAGGAARA REPAGASGAS
APGGAPQSGV APSGHRPASR DDRIDRIDRD DGHDRAPAQD HHEALIRSET FKTIRAVVFS
SMNMSAALMM SRAEVREGIE QAAADVIARE RLTVTLAEQT LIVDEILNDM FGVGPIEPLL
ADERVTDILV NGPDQVYVER AGKLELTPLK FRDNAHVINV AQRIAAAVGR RVDESSPMVD
ARLADGSRVN VVLPPIAIRG ASISIRKFAK RNITLARMAQ QGNLSQAMVE VLKIASACRL
NIVISGGTGS GKTTLLNALS HFIDSHERIV TIEDAAELQL QQPHVVSLET RPENSEGLGG
VSQRDLVRNA LRMRPDRIIL GETRGPEAFD VLQAMNTGHD GSMTTIHANT PRDAITRLES
MVMMANGNLP LVSIRRQIAS AVHMILQIER MRDGVRRVTR VTEIAGMEGD VVITQDLFAF
RYDASAFQEQ VHGMFESSSL RPAFAQRAAY YGLEGALLGA LQP
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