Gene BURPS1106A_1883 details

Gene Information

• Locus tag: BURPS1106A_1883
• ID: 4902715
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Burkholderia pseudomallei 1106a
• Kingdom: Bacteria
• Replicon accession: NC_009076
• Strand: +
• Start bp: 1839352
• End bp: 1839870
• Gene Length: 519 bp
• Protein Length: 172 aa
• Translation table: 11
• GC content: 77%
• IMG OID: 640135113
• Product: peptidase A24A, prepilin type IV
• Protein accession: YP_001066148
• Protein GI: 126455283
• COG category: [O] Posttranslational modification, protein turnover, chaperones; [U] Intracellular trafficking, secretion, and vesicular transport
• COG ID: [COG4960] Flp pilus assembly protein, protease CpaA

Plasmid Coverage information

• Num covering plasmid clones: 8
• Plasmid unclonability p-value: 0.433121
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

GTGGCGCGCC GGCCGGACTT CCCGATTTCA CGCACGCCCA TGATTCTCCC GCTCAAGCTC 
GTCGCCAGTT GGACGCTCGC GTCGCTCGCG CTCGCCGATC TGCGCACGCG GCGGCTCGCG 
ACCTTCGCGG TCGCGCTCGT CGGCGCGCTG TACGCCGCGC TGGCGCTCGT GGGCGCGCCG 
GGCGACGGCG GCTTCGCGTC GCATGCGGCG CTCGGCGCGG CCGCGTTCGC GCTCGGCGCG 
GCGATGTTCC GCGCCGGCTG GATCGCCGGC GGCGATGTCA AGCTCGCGGC CGTGGTGTTT 
CTATGGGCAG GCCCCGCGCA TGCGTGGCCC GTCGCGTTCG CGATCGGCGT CGGCGGCTTG 
GCCGTCGGCG CCGTCTGCAT CGCGGCCGGG CGTGCGCCGC GCGTGCTCGC GTGGTTCGCG 
CCGGCGCGCG GCGTGCCGTA CGGGGTCGCG CTCGCGGCGG GCGGCCTGCT CGCCGTATGG 
GCGCCGGCGG CTTGCCGGCT GCCCGGATGT CTCGGATGA 

 

Protein sequence

MARRPDFPIS RTPMILPLKL VASWTLASLA LADLRTRRLA TFAVALVGAL YAALALVGAP 
GDGGFASHAA LGAAAFALGA AMFRAGWIAG GDVKLAAVVF LWAGPAHAWP VAFAIGVGGL 
AVGAVCIAAG RAPRVLAWFA PARGVPYGVA LAAGGLLAVW APAACRLPGC LG