Gene BURPS1106A_1820 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBURPS1106A_1820 
SymbolrpiA 
ID4902492 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia pseudomallei 1106a 
KingdomBacteria 
Replicon accessionNC_009076 
Strand
Start bp1783112 
End bp1783807 
Gene Length696 bp 
Protein Length231 aa 
Translation table11 
GC content68% 
IMG OID640135050 
Productribose-5-phosphate isomerase A 
Protein accessionYP_001066087 
Protein GI126454328 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG0120] Ribose 5-phosphate isomerase 
TIGRFAM ID[TIGR00021] ribose 5-phosphate isomerase 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.867635 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGACACAAG ACGAACTCAA ACGCCTCGTC GGCGAGGCCG CTGCCCGATA CGTGACCGAA 
AACGTGCCGC AGGGCGCGGT GATCGGCGTC GGCACGGGCT CGACCGCCAA CTGCTTCATC
GATGCGCTCG CGGCCGTCAA GGATCGCTAT CGCGGCGCGG TGTCGAGTTC GGTGGCGACG
ACCGAGCGCC TGAAGTCACA CGGCATCAAG GTGTTCGATC TGAACGAGAT CGAATCGCTG
CAGGTGTATG TCGACGGCGC CGACGAGATC GACGGGAGCG GCGCGATGAT CAAGGGCGGC
GGCGGCGCGC TCACGCGCGA GAAGATCGTT GCTTCGGTCG CCGAAACGTT CGTGTGCATC
GCCGATGCGA GCAAGCGCGT GGCGGTGCTC GGCCAGTTCC CGCTGCCCGT CGAGGTGGTG
CCGATGGCGC GCACCGCGAT CGGCCGCCGG CTCGCCGCGC TGGGCGGCGT GCCCGTGCTG
CGCGTGAAGC AGGACGGCGC GCCGTACGTG ACCGACAACG GCAACGAGAT TCTCGACGTG
AAGGGCCTGC GGATCGACGA TCCGCGCGCG CTCGAAGCGG CGATCAACGG CTGGCCCGGC
GTCGTGACGG TCGGGCTGTT CGCGCAACGC GGCGCGGATC TCTGCCTGCT CGGCACCGAG
CGCGGCGTCG AGACGCTCCG TTACGCTGCG CATTAA
 
Protein sequence
MTQDELKRLV GEAAARYVTE NVPQGAVIGV GTGSTANCFI DALAAVKDRY RGAVSSSVAT 
TERLKSHGIK VFDLNEIESL QVYVDGADEI DGSGAMIKGG GGALTREKIV ASVAETFVCI
ADASKRVAVL GQFPLPVEVV PMARTAIGRR LAALGGVPVL RVKQDGAPYV TDNGNEILDV
KGLRIDDPRA LEAAINGWPG VVTVGLFAQR GADLCLLGTE RGVETLRYAA H